Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157914
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Entry
110157914 CDS
T05002
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110157914 (rbm39)
Spliceosome [BR:
bpec03041
]
Common components
Common spliceosomal components
General mRNP proteins
110157914 (rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_10
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
110157914
NCBI-ProteinID:
XP_020777963
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDEYKSSHTNGHEDHSKKKKRSRSRSPASRKRXXXXXXXXXXXX
XXXXSRSRERKRSRSKERHRSRSKSKERSGRYKGRKSPIRKHSRSRSPIIKKEKSPIRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VETSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANALQRGSMGPMRLYVGSLHFNI
TEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDYSMASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSVQFGNAPVTGVPPPAQPLNLPAQPIATHCLQLSNLFNPQAENDPNWATEIQDDVIDE
CNKHGGVVHIYVDRNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHS
LFPDSVTATMLLMPSRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgatgtggaggccatgctggaggctccttacagaaaggatgagtac
aagtcctctcatactaatggacatgaagaccatagcaagaagaaaaaacggagtcgtagc
cgcagtccggcctctcgtaagagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnngagccggagccgtgagcgcaaacgcagccgcagtaaagagcgccaccgc
agccgctccaagagcaaggagcggtctgggagatacaagggacgcaagagccccatacgc
aagcactcaagaagccgaagtcccatcatcaaaaaagaaaagagtcccataaggcaacct
attgataatctaaccccagaggagagagatgcgcgcacagtcttctgcatgcaactggca
gcacgaatccgtgctcgtgatctagaagacttcttttcagccgttggaaaagtcagggat
gtaaggataatctctgacagaaattcaaggaggtcaaagggcattgcctacatagagttt
gtagaaacatcgtctgtaccgcttgccattggactaactggccaaagactattgggagtc
cctattattgtacaggcctcacaggcagagaagaacagagctgctgcagctgctaatgca
cttcagaggggcagtatgggtccgatgcggctgtatgtggggtcattacacttcaacatc
accgaggaaatgcttcgggggatctttgagccttttggaagaattgagtcaatacaactt
atgatggacagtgagaccggaagatctaaaggatatggattcatttcctttgcagatgca
gagtgtgccaaaaaagccctggagcagttgaatggttttgagttggcaggacgtccaatg
aaggtgggacatgttacagagcgctcagactattcaatggccagctccttcctggacaac
gatgaacttgaaagaactggcattgacctgggtaccacaggacggctacagctcatggct
cggctagctgaaggaactggcctgaagatcccaccggccgctcagcaagctctacagatg
actgggtctgtacagtttgggaacgcaccagttactggggttccacctcctgctcaaccc
ttgaacctcccagcacagccaatagccacgcattgtcttcagctgtccaaccttttcaac
ccacaagctgaaaatgatccaaactgggccacagagattcaagatgacgtcattgatgag
tgcaacaaacatggtggtgttgttcacatttatgtcgacagaaactcccctcaaggtaac
gtgtatgtcaaatgcccatcaatccctgcagctatggctactgtaaatgcgcttcacgga
cgttggtttgcagggaaaatgatcactgctgcatatgtacctctgccaacctaccacagc
ctgtttcctgattcagtgacggcaacaatgctcctgatgccctcccggcgatag
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