Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158307
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Entry
110158307 CDS
T05002
Name
(RefSeq) collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04382
Cornified envelope formation
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110158307
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110158307
09142 Cell motility
04820 Cytoskeleton in muscle cells
110158307
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110158307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110158307
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110158307
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110158307
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110158307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110158307
NCBI-ProteinID:
XP_020778421
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MKVLACVVVFLVASTYAQGGKKSDEPCNGRDCSRGCQCNPEKGSRGRPGPLGEVGPSGAE
GPRGGPGHMGPKGEKGHIGLKGPSGPKGDKGPMGVPGFSGNDGVPGHPGADGPRGPPGLD
GCNGTRGEPGDPGYGIGPPGNPGPAGIVGPKGQKGEPVYISDNGGTSLPGFPGSNGPPGV
RGPDGGPGAPGPIGPNGYPGLPGPPGPPGPMGSHGEGYWGEKGDKGDVGLPGPSGSTGDE
PLVSEQTLTIYKGDRGDPGPKGIRGFPGTPGRPGPFGYPGLVGEKGIPGYPGARGPPGFN
GPPGGPGQQGYRGNPGYPGAPGIPGGKGEQGEPGFPGPPAYVTDLGTAVQGPPGDNGRPG
IPGPRGDQGPPGFPGLPGVPGTYTGIGARGAPGFPGTPGPKGEKGSPGIPSYGPEGQSGS
PGLPGQPGVAGPPGPSGFNPCVIYPNGQPDDVASGIATPGEPGLPGARGEPGSPGFKGVR
GDVGDCACAGGGVPGTPGAEGPPGPTGSPGFPGAKGEPGDGGAPGFNGLQGPPGPAGPRG
GFGRKGEKGASYYPSQGLGVKGEIGAQGPRGPTGETGKPGRDGLPGFPGAVGPPGDAGYG
TVGEKGFAGFPGPKGLPGGPGEPGVGYAGTPGYRGEPGDPGIPGFPGTPGVPGEKGDSSC
GGVYDGQKGSGTNLPCTIPGEPGEPGYPGIPGRPGPKGQPGSSGNPGRPGFDGTKGERGD
PGYGGQPGPQGFPGPRGDPGIPGVPGTSLNGARGKDGVPGIPGAKGQPGDVLGATPGPPG
LNGFPGAPGDKGLPGTPGGPGAPGLDGRNGVPGLKGERGVDGAPGFPGAQGPPGEYTGGV
PGRRGEPGPKGLSGPPGCPGYPGRKGDRGDPGFPGPSGMKGTPGLPGIPGSPGPQGPPGL
PGPGTVPGIPGIPGVKGERGFPGLMGFPGLPGRPGSPGFPGGKGFPGDPGRNGRDGGPGF
TGPKGERGYPGRPGPPGVAPPSLLVEKGDYGNPGSSGFPGFTGPRGDKGLPGLPGRQGLP
GLPGFAEQSKGLPGVPGLSGIPGTPGFPGPKGEAGINGFPGGAGPRGDDGAPGLPGNPGE
PGRPGAKGLPGDSFGGYPGGPGPKGLPGEPGFSGGRGLDGARGDDGFPGSPGFPGSKGQP
GEPGGPGITGSPGFPGPKGLPGYPGPRGSDGLPGGPGGPGGPGAKGLPGSPGLDGLNGLP
GPKGLPGTPGTSLGGRPGTPGIPGQKGERGVSFPGIPGFNGAKGERGAPGGPGLPGFPGR
PGPPGPTAVSSAVGPLGDPGLPGLDGEYGFQGPPGPPGPPGPGTSQGDRGDSGLPGFPGT
PGQKGEPGLPGGPGAPGSTGFKGERGEPGFSGGSGLKGFSGDPGYYGGKGPKGFRGPPGR
KGPPGLTLPAPPITRPLYGDMGVAGESGGSGSPGEPGQPGLPGRPGPKGRLGSVGRLGRP
GSPGSPGFLGDAGPPGFPGPNGEQGLPGAPGRPGPPGAVGRSYSIGYTMVKHSQNSQIPM
CPQGMAKLWDGYSLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDK
SYWLSTTAPIPMMPVAEDQIRPYISRCAVCEAPSQAVAVHSQDTTIPNCPAGWRSLWIGY
SFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGGKGTCHYFANKYSFWLTTVDPRE
EFIFSPNPDTLKGGQERSKVSRCQVCSKIL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctagcctgcgtggtcgtattcctggtcgcgtccacctatgcgcaagggggt
aagaagtctgacgagccgtgcaatgggcgagactgcagcagaggatgtcagtgcaaccca
gagaagggcagccggggtcgtcctggacccctgggtgaggtgggtcccagtggagctgag
gggcctcggggaggacccgggcacatggggcccaaaggagagaagggccacatcggactg
aaggggccatccggacccaagggagacaaggggcctatgggtgtgcccggcttctcagga
aatgatggtgtgcctggccaccccggcgctgatggtccaaggggtcccccgggtcttgat
ggctgtaatgggacgagaggcgagcctggggaccccggctatggcattggaccacctgga
aatcctggacctgctggaatagttggaccaaaaggacagaaaggagagcctgtttacatc
tctgacaatggtggcacgagtttaccaggatttccaggatccaatggcccacctggagta
cgcggccccgatggtggacctggagctcctggaccaattggacccaatggatatcctggc
ctgcctggtcctcccggtcctccagggcccatgggaagtcatggtgaaggatattgggga
gaaaagggagacaagggtgacgttggtcttcctggtccgagtggctccactggagatgaa
cctttagtcagcgaacagaccctcaccatttacaaaggagacaggggtgacccaggtcca
aagggaattcgtggattccctggtaccccggggcgacctggaccatttggatatcctgga
ttggttggagagaaaggaatcccaggatatccaggcgcacgtggcccacctggttttaat
ggacctcctggtggtccaggtcagcagggatacagaggcaatccaggctatccaggggcc
ccaggaatcccaggaggaaagggagagcaaggagaacccggatttccaggacccccagcg
tatgtcaccgatttgggcactgctgttcaaggtccacctggagacaacggccgtcctggg
atccctggtccccgcggcgaccaaggtcctccaggatttcctggccttcccggagttcca
ggaacatacacaggaattggagcacgtggagccccaggtttccctggtacaccaggtcca
aagggagagaagggcagcccaggtatcccaagctacggccccgagggtcagtccggctcc
cctggactcccaggacaacccggagttgctggaccccctggaccctctggattcaatccc
tgtgtcatctatcctaacggacaaccagatgatgtcgccagtggaattgctaccccagga
gagcctggactgccgggggccagaggagagccaggaagccctgggtttaaaggagtcaga
ggtgatgttggagactgtgcctgtgctgggggcggtgttccggggaccccaggcgctgag
ggaccccccggacccactgggtcccctgggtttcctggagcaaagggagaacccggagac
ggaggagcgccaggattcaacggacttcaaggacctccaggcccagctggacctcgtggt
ggatttgggcgtaaaggagagaagggtgcttcatattatcccagtcagggtttgggggtg
aaaggcgagattggagcccagggacccagaggacccaccggagagactggaaaaccaggc
agagacggactgcccggtttccccggagccgtcggacctcctggcgatgctggttatggc
acagtcggtgaaaagggcttcgcaggattccccggtccaaagggtcttcctggaggtccc
ggagagccaggggtgggctacgcagggacccccggatacagaggcgagcctggggaccct
ggtatccctggattccctggaacacccggagtccctggagagaaaggtgacagcagctgt
ggaggggtttatgacggccagaagggatcgggcaccaatcttccctgcactattcctgga
gaacctggagagcccggttatcctggtatcccggggcgaccagggcctaagggacagcct
gggtccagtggaaacccagggcgtcctggttttgatggaacaaaaggagaaagaggagac
ccaggttacggaggccagccaggaccacaaggtttccctggacccagaggagaccctggt
attccgggtgtaccaggaaccagtttgaatggagcgaggggaaaggacggtgtgcctggt
attcctggagcgaagggccaacctggagatgtgctgggggccactcctggaccaccaggg
ctcaatggctttcctggggcccctggagacaagggcctgcctgggacccccggaggacct
ggtgcacctggtttggatgggcgtaatggtgttcccggattgaagggagagcgaggagtt
gatggtgcaccaggtttccccggagctcagggacctccaggagaatacacaggaggggtc
ccaggacggcgaggagaacctggtcccaaaggactgagcggacccccaggctgtccaggt
tatcccggtcgtaaaggagacaggggagatccaggattcccgggcccctctggcatgaag
ggcactccgggtctgcctggcatcccagggagccccggaccccaaggaccccccggactc
cccggacctggcaccgttcccggaatccctggaataccaggtgtcaagggtgagagaggt
ttcccaggcttaatgggtttccctggactccctggtcgtcctggatctcccggttttccg
ggtgggaagggttttccgggagaccccggaagaaacggacgggacgggggccctggattc
actggacctaaaggtgagagagggtaccccggccgccctggtccccccggtgtggcccct
ccctctctgcttgtggagaagggagattacggaaaccccggtagcagtggttttcctgga
ttcactggacccagaggtgacaaaggtctgccgggcctgcctggtcgtcagggtctaccg
ggacttcctggttttgcggagcagagtaagggtcttcctggagttcctggtctctctggg
ataccaggaacaccaggcttccccggacccaaaggagaggccggcatcaatggtttccct
gggggggctggaccaaggggtgatgatggtgctcctggtttgcctggtaatcctggagag
cctggtcgtcctggtgctaaaggtcttcctggagattcttttggaggatatccaggaggc
cccggacccaaaggactccccggagagccaggcttctcaggaggccgtgggctggatgga
gctcgtggagatgatggttttccaggaagtccaggattccccggatccaaaggacagcct
ggagaacctggaggccctggaataacaggttcccctggtttccctggtcccaaaggtctt
ccgggatacccaggaccaagaggctcagacgggttacctggaggtccaggtggacctgga
ggacctggagctaaaggtttgcctggttcccctggtttggatggacttaatggactccca
ggacctaaaggacttccaggaacgccaggtaccagtttaggaggtcgtcccggaactcca
ggtatccccggacagaagggagagagaggcgtgtctttcccaggaatcccaggattcaat
ggggctaaaggagaaaggggagcgccaggtggtcctggactgccaggtttccccggtcgc
cctggtccacctggtcccactgctgtgtccagtgctgtgggtccactcggagatcctggt
ctgcctggtttggatggagaatatggtttccagggcccccccggtccccctggtccccct
ggcccaggcacctctcagggagatagaggcgattccggtctccctggttttcctggaact
ccgggacagaaaggagagcctggtttgcctggaggccctggtgcccctgggagtactggg
ttcaaaggagagagaggtgaacctggattcagcggtggttctggtctgaaaggattttct
ggagatcctggatattacggaggaaaaggaccaaaaggatttagaggtccccctggtcgc
aagggtccccctggtctcaccctcccagccccccctatcactcggcctctgtacggagac
atgggcgtggctggagagtccggaggttctggatcacctggagagcctggtcagcctggc
ctccctggacgcccaggtcctaaggggcgcctcggttctgtgggcagattgggtagaccc
gggtctcctggttcccctggtttccttggtgatgctggacctcctggattccctggacca
aatggagagcaaggtttacctggagcacctggtcgccctggaccccccggagcagtgggc
cgcagttacagtattggctacacgatggtgaagcacagtcagaactcccagatccccatg
tgcccccagggcatggccaaactgtgggatggatacagtctgctctatgtggagggacag
gagaaggctcataaccaggatctaggtcagccaggctcttgtctccctcgcttcagcacc
atcccattcctttactgttctccaaacgaggtgtgttattacgccagccgcaatgataag
tcctattggctctccaccaccgcccccatccccatgatgcctgtggctgaagaccagata
cggccctacatcagcagatgtgcggtgtgtgaagctccgtcccaggctgtggcggtccac
agtcaggacaccaccatccccaactgccccgcgggctggaggagtctctggatcggatac
tcgttcctcatgcacaccgcagctggggcagagggtggcgggcagtccctggtctctcct
ggctcatgtctggaggacttccgggcgacgccttttattgaatgcaatgggggcaaaggg
acgtgccattacttcgccaacaagtacagcttctggctcaccacggtggacccccgagag
gagtttatcttctctcccaacccggacactctgaagggagggcaggagcgctccaaggtt
agtcgctgtcaagtctgcagcaagatcttgtag
DBGET
integrated database retrieval system
