Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158459
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Entry
110158459 CDS
T05002
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03030
DNA replication
bpec03420
Nucleotide excision repair
bpec03430
Mismatch repair
bpec03440
Homologous recombination
bpec03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110158459
03420 Nucleotide excision repair
110158459
03430 Mismatch repair
110158459
03440 Homologous recombination
110158459
03460 Fanconi anemia pathway
110158459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110158459
03032 DNA replication proteins [BR:
bpec03032
]
110158459
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110158459
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110158459
DNA replication proteins [BR:
bpec03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110158459
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110158459
MMR (mismatch excision repair)
110158459
DSBR (double strand breaks repair)
HR (homologous recombination)
110158459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
OB_MEIOB_N
POT1
RADX
Motif
Other DBs
NCBI-GeneID:
110158459
NCBI-ProteinID:
XP_020778614
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MTVRLTEGAIEALFKGTPISNTVLQLLNSKKIGNDLPRIRLIMSDGVHSSASFLLATQLN
HLFDENQLEPYCVCLLKKVVVNSLKDGRLVISIVDIEVLKSAEEVGEKIGNPVLYNSNST
DLTSSQEGAASGTPPSASEVEESNSFSPKSNKTSPQKHLSSTPPSTSTSEHTKFNFKSNS
KYKTPSPQKFIPSTPPSTSKARPGPYTPSPSKGRGRGYTGKSPMKSANTLPDSPAKVIPI
SALNPYQTKWTIKARVTNKSKERTWSNSKGEGKLFSFEIVDQSGEIKVTAFNKEVEKFYS
LLEQGKVYYISKATLKAANKQFNTLSHEYEMTLHANSSIVPCNDGDGVPDVHCNFVPISE
LEQREKDTILDVIGVVKSAEDVSRITTKSSREVSKRALSLVDTSGKVVTATLWGEEAEKF
DGSGHPVVAIKGARLSDFGGRSLSALFSSTILVNPDLPEAFRLRAWFDREGHAADSQSLT
EARLVGSGAKMNWKTLSDVKTEHMGHEEKADYFSCVATVVYIRKENCLYRACPSSNCNKK
VLDQHNGLYRCEKCDRDYPNFHYRLLLSANLSDYGDNQWVTCFQETAEALLGHSAQRLGR
LRDTDEEAFNQVFQRATFTTHIFKNRVKLETYNDETRVKVTVLEILPVDHKEYSRRLIRN
IHKMSAST
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgagactcacagaaggggcaatcgaagccctgttcaaaggcacaccaatttct
aatacagtgctccagctgttgaactccaaaaagattggaaatgacttgccaaggattcga
cttattatgagtgatggggtacacagttcagcatccttcctacttgcgacacagctaaac
catctttttgatgagaatcaactggaaccatactgtgtatgtctgttgaaaaaagttgtt
gtcaattctttaaaagatggaagacttgtgattagtatagttgacattgaagttctcaag
tcagctgaggaagttggagagaagattggaaatcctgttctgtacaattcaaatagtaca
gatctaacctcttcacaagagggggcagcttctggtacccctccctcggcatctgaggtt
gaggaaagcaactccttcagcccaaagagcaataaaacatcaccacagaagcatctctca
agtacccctccctccacatctacttcagaacatacaaaattcaacttcaagagcaatagt
aaatataaaaccccgtcaccacagaagtttatcccaagtactcctccttcaacatcgaaa
gcaagacctggaccttacactccctctccttctaaaggaagaggccgaggctatacaggg
aagtcccccatgaagagtgcaaacaccttgcctgactctcccgctaaagtcatccccatt
tcagcgctgaacccataccagaccaagtggactatcaaagcccgagtcactaataagtct
aaagaacggacttggagcaattcaaaaggagaggggaagctgttctcatttgaaattgtg
gaccagagtggagaaatcaaggtcactgctttcaacaaagaagtggaaaagttttactct
ctactggagcaaggcaaggtgtactacatttccaaggcaacactgaaggcagccaataaa
cagttcaacacgctgagccatgagtatgagatgacgctgcatgccaactcctccattgta
ccatgcaatgatggcgatggcgtccccgatgtgcactgcaattttgtacccatttctgaa
ctggaacaaagagaaaaagatacaatactcgatgtgatcggtgtggtgaagagcgcagag
gacgtgtcacggatcaccactaagagcagcagggaggtctccaaaagggccctcagcctc
gtggacaccagtgggaaagtggtgactgcgacgctctggggagaggaggctgagaagttt
gatggctctgggcacccggttgttgccatcaaaggggctcgcttgtctgattttgggggc
agatcgctctccgctttgttcagctccacaatcttggtcaatccagaccttcctgaggcg
ttcagattaagggcctggtttgaccgagaaggccacgcggccgacagccaatccctgaca
gaggcgaggttggtgggcagcggagcaaaaatgaactggaaaacactgagcgatgttaag
actgagcatatggggcacgaagagaaggcggattacttcagctgcgtggctacagtggtg
tacatccgaaaggagaactgcctgtaccgggcctgtccctcctcaaactgcaacaaaaag
gtcctggatcaacacaacggcctgtaccgctgtgagaaatgtgaccgcgactaccccaac
tttcactacagattgctgctttcggcgaacttgtccgactacggggacaaccagtgggtg
acgtgtttccaggagacagctgaggcgctgctggggcacagtgcacagcgtctgggtcgg
ctcagagacacagacgaggaagcatttaaccaagtgttccagagagctaccttcacaacg
cacatctttaaaaacagagtaaagctggaaacgtacaacgatgagacccgggtgaaggta
actgtgttggaaatcctcccggtggaccacaaggagtacagccgcagactcatcagaaac
atccacaaaatgtccgcctcaacttga
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