Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158468
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Entry
110158468 CDS
T05002
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpec03009
]
110158468 (ddx52)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110158468 (ddx52)
Ribosome biogenesis [BR:
bpec03009
]
Eukaryotic type
90S particles
Helicases
110158468 (ddx52)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110158468
NCBI-ProteinID:
XP_020778627
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MDAFDLFRKLGSGAKFDLKRFGQDAARFKAHRPKEADAADPLFAIDYFGKSSTNTRQQQE
EDDHNKDDAVNASEESDAGVKRKRKDERADGKTIKNKKKKSEVEFTALSEHNKAADGEGI
SWTSDLDKRIQSLQSGDKDKNTLKRLKHLHQEKVNRIRAQHRINVHGCDVPDPVCTFEKL
QSEYKLQSCILQNLKDAGLDSPTPIQMQAIPLMMHGREVLACAPTGSGKTLAFCLPLLAN
LQQPVNIGFRAVVISPTRELASQTYRELLRLSDGVGFRVHIIDKASLAAKKYGPQSSKKY
DILVSTPNRLIYLLNQDPPSLDLSSVEWLVVDESDKLFEDGKSGFRDQLATIFLACSGPK
VRRAFFSATCTPDVEQWCRLNLDNLVTVNIGHRNTAVETVEQELLFVGSEDGKLVAMRDI
IKKGFLPPMLVFVQSIERARELFHELVYEGINVDVIHADRTQQQRDNVVNSFRSGHIWVL
ICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHSGKAITFFTENDKPLLRS
IASVIKQAGCPVPDYMIGFKKIHSKVKRQLQKKPPKRSTICTTPRFLMKKKPKSTQKGKN
GAGGESGSQSSIKQMMTVNNTKKRKNQHAQKESAAESVQKTGSKKMASRTQSKIKKKKVK
MPQET
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttgatttattccgaaagcttggctctggggctaaatttgatctgaaaaga
tttggtcaagatgccgcacggtttaaggcacacagacccaaagaagcagatgccgcagat
cctctttttgccattgactactttggcaaaagctcaaccaacaccagacagcagcaggag
gaagatgaccacaacaaagatgatgctgtgaatgcaagtgaagaaagcgatgctggagtt
aaaagaaagaggaaagatgaacgagcagatggcaaaacaattaagaacaagaagaaaaag
tctgaagtggaatttacagctctaagtgaacataacaaagctgctgatggagagggaatt
tcttggacatcagatttggacaaaagaattcaaagcctgcaaagtggagataaggataag
aacaccctaaaaaggctgaagcatcttcatcaggagaaggtgaatcgtattcgcgctcaa
catcgtataaatgtacacggttgtgatgtccctgatcctgtgtgtacatttgaaaagctt
caatctgaatacaaacttcaatcatgtattcttcaaaacctcaaagatgcaggcctcgat
tctcccacacctatccagatgcaggcaatacctctgatgatgcatggtcgtgaagtcttg
gcatgcgcccctacaggttcaggaaagactttggctttctgtttgcctctgcttgcaaat
ctgcagcaaccagtcaacatagggttcagagctgtggtcatatccccaaccagagagttg
gccagtcagacttacagagagctacttcgcttgtcagatggagttggatttagagttcac
attattgataaagcttccttggcagctaaaaaatatggaccacaatccagcaaaaaatat
gacatacttgtcagtaccccaaatagattaatctaccttttaaatcaggatcctccatct
ttggacctcagcagtgtggagtggcttgttgtggatgagtccgataaactgtttgaggat
ggtaagagtggattcagggatcagctggctaccatctttttggcctgttctggtccaaag
gttcgcagggccttcttcagtgccacctgtacgccagacgttgagcagtggtgtcgcctc
aatctcgataacttggtgactgtcaatataggacacaggaatacagctgtggagaccgtg
gaacaggagctactgtttgttgggagtgaggatggaaaactagtggcaatgagagacatt
atcaaaaaaggtttcttgcctcctatgttggtatttgttcagtctatagagcgagcaagg
gagctcttccatgagttggtatatgaaggcattaatgttgatgtaattcatgcagaccgc
acacagcagcagagagacaatgtagtgaacagttttcgttctggtcacatttgggtgttg
atttgtacagcattgcttgcccgaggaatcgacttcaaaggtgtaaacctggtactaaat
tatgactttcccaccagtgctgtggaatacatccatagaataggtcgtacgggcagagct
ggccattctggaaaagccataaccttttttacagaaaatgataaaccactcctgcgcagc
attgccagtgttataaaacaagctgggtgtcctgttcctgattacatgattggtttcaag
aaaatacacagcaaagtcaagagacaacttcagaagaaacctccaaagagaagcaccatt
tgcacaactccacgctttttgatgaagaaaaagccaaaatccacccaaaaaggaaagaac
ggagcaggaggtgaaagtggatctcaaagcagcatcaagcaaatgatgactgtaaacaac
acgaagaaacgtaaaaaccaacatgcacagaaagaaagtgcagctgaaagtgtgcaaaag
actgggtcaaagaaaatggcatcaaggactcaatcaaaaattaaaaagaaaaaggtgaag
atgccacaggaaacttag
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