Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158480
Help
Entry
110158480 CDS
T05002
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110158480 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110158480 (exosc8)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110158480 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110158480
NCBI-ProteinID:
XP_020778645
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKEHCRSDGRELTEFRATTLNIGSISTADGSALVKLGNTTVIC
GIKAELSNPTVEAPGKGYMVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEIIK
TEDLCIERGKLCWVLYCDLMCLDHDGNVLDACIIALLAALKNAQLPEVTISPDTCLPEVN
FDKKHEMQIHRHPVGSSFGVFDKSIVIVDPTAEEESLLTAQLTVVTDEEERLCSMHKPGG
SSLSGEKLQECINRAVVRQREIQKLIDKVLQSVKTPQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgcagaaccgctcgagtatcacaggagctttttgaaagaa
cactgtcggtctgatggacgtgagctgacagagttcagagccactacattgaacataggg
tctatatccacagcagatggctctgctctggtgaaactcggaaacaccactgtcatctgt
ggcatcaaagcggaactatcaaaccccacagttgaggcaccaggtaaaggttatatggtg
ccaaatgtggacttacctcctctgtgctcctctcggtttcgtccagggcctccaggagag
caagctcaggctgccagtcagtttattgcagatgtaattgaaagttctgaaataataaaa
acagaagacttgtgcattgaaaggggaaagctgtgctgggtgctctattgtgacttgatg
tgtcttgaccatgacggaaatgtccttgatgcctgtataattgcgctcttggcagcttta
aaaaacgcacaactaccagaagtcaccattagccctgacacttgtttgcctgaagtcaat
tttgataaaaaacatgaaatgcagattcacagacatccagtgggctcgtcttttggggtg
tttgacaaatctatcgtgattgtggatccaactgcagaggaggaaagcctattgacagca
cagctcactgtagtgacagatgaggaggagcgtctctgttcaatgcacaaaccaggcggt
tcatcattatcaggagagaagctgcaggagtgcataaaccgtgcagtggttcgacagaga
gaaatacagaagctcattgataaagtcctacagagtgtgaagacaccacaatga
DBGET
integrated database retrieval system
