Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158718
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Entry
110158718 CDS
T05002
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110158718 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110158718 (smarcc2)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110158718 (smarcc2)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110158718 (smarcc2)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110158718 (smarcc2)
PBAF complex
110158718 (smarcc2)
GBAF(ncBAF) complex
110158718 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
110158718
NCBI-ProteinID:
XP_020778899
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRIWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKTTSSHIVVP
IPSSLEDEEWVRPVMKRDKQVLLHWGYYPDSYDTWIAASEVEAAVEDAPSVEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGHPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNAKKGPTTPYTKSKRGQREEEPEDLSKDADEASPVAPSDEGNPAKTN
NTKKDSDSTPVKGDNDEQEDESMETTGKEEEEGSPSVKGEPVKTSDLHEDNVTEQTHHII
IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA
CRRNLAGDVCAIMRVHAFLEQWGLINYQVESESRXXXXXXXXXXXXXXXXXXXXXXXXXX
VLADTPSSLVPLQPKPAQTPAPIMSFPEKVKDKPTDLQNFGLRTDMYSKKTNSTKSKSGA
STMRDWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEEAATA
LGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAH
VRRVEEAARVSGRQDPLFGLEGSGIAGTAMEEGERTEESNEESKTETPPAEEKKEAKENK
DGGNEEEDKQPENGKKEEERRESEGERDTEKTEAEGDGEKEKEGKENTEEAQREGESEGE
RKTKVEREVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR
HFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHQTGTP
HGPAPPAGATTPGQQQQQTTSSSSSTPAPPPAPSPAPSASSGTATETGAPGAHTNSPCPP
GHAPPNHPSAGALPSLHEHHGPHPGETHPPNAPVPPPQ
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggccccaatgtgaaatatttcgaggcgtcggacacc
gtttctcagttcgacaatgtccgcatatggctgggcaagaattacaaaaagtacatccaa
gctgaaccacccacaaacaagtccctgtccagtctggtggtgcagttgctgcagtttcag
gaggaggtctttggacgccacgtcagtaaccctcctctcaccaaactaccgatgaagtgt
tttctggattttaaatctggaggagctctgtgtcacatcctcgctgctgcctacaagttc
aagagcgaccaaggatggcgcaggtttgacttccaaaatccttcgagaatggaccgaaat
gtggagatgttcatgaccatcgagaagtccttagtccagaacaactgcctttccagaccg
gtgatctatctgagctcagacattgaaccaaagcttctggggaaactgaaggatatcatc
aaaagacaccagggttcagtgacagaggacaagaccaccagctctcatatagttgtgcct
atccccagcagcctcgaggacgaggagtgggtgcgtccagtcatgaagagggacaaacag
gtgctgctgcactggggatattaccctgacagttatgacacctggatcgcggccagtgaa
gtggaggctgctgtggaagatgcccccagtgtagagaagcccagaaaggttcacgccaag
tggatcttagacttggatcagtacaacgagtggatgaatgaggaggactacgaggtggga
gagggacatccgaagaggaagaggatctctgccaaaaccctgacggacgaggtgaccact
ccggacgagaggagggacaagaaaccgggaagtgccaaaaagaggaaacgctccccctct
ccctcccccacccctcccccacaggagagcaagaagaagaacgccaagaagggacccacg
accccgtacacaaagtcgaagcgcgggcagagggaggaggagcctgaggatctgtccaag
gacgcagacgaagcttcaccggtcgctccatccgacgaaggaaaccccgcgaagaccaat
aacaccaaaaaagactctgattcaactccagtgaaaggagacaacgatgaacaagaggac
gagtccatggaaacgacaggaaaggaggaggaggaagggtctcccagtgtaaagggtgaa
ccggtcaaaacctcagatctgcatgaagacaacgtgacagaacagactcatcatattatt
atcccaagttacgccgcatggtttgactacaacagtgttcatgcaattgagcgccgagcc
ctaccagagttctttaatgggaaaaacaaatccaaaactccagaaatttacctggcgtat
agaaacttcatgattgacacataccggctgaaccctcaggagtatctgacctccacagcc
tgtcgcaggaacctggcaggagacgtgtgcgccatcatgagggtccatgcgttcctggag
cagtggggactcataaactaccaggttgagtctgagagccgccnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnt
gtgctggcagacacgccctccagcctggtgcccctgcagcccaaacctgcacagactcca
gcaccaatcatgtcgttccctgaaaaagtgaaagacaaacccacagatctgcagaacttt
gggctccgaactgacatgtacagcaagaaaaccaactccacaaagagtaagagtggagcc
agcacaatgagggactggacagaacaagaaacactgctattactggagggtctggagatg
tacaaagacgactggaacaaagtatcggagcatgtgggcagcaggacccaggacgagtgc
atccttcacttcctgcgtctgcccatcgaggacccctacctggaggaggccgctactgca
ctgggccccctggcgtaccagcccgtgcccttcagccaggcaggaaaccccgtcatgagc
accgtcgccttcctcgcctctgtggtcgacccgagagtggcatctgctgctgccaagtct
gctctggaggagttttctcgtatgaaggaggaggtgccagctgctctggtggaggctcac
gtgcggagggtggaggaggcggcgcgggtcagtgggagacaggaccctctgtttgggctg
gaggggagtggcatcgcgggcactgccatggaggagggtgaacggacagaggagagcaat
gaggaaagcaaaactgaaactccaccagctgaagaaaagaaagaggcaaaggaaaacaaa
gacggaggaaacgaggaggaggacaaacagccagagaacgggaagaaagaggaagaacgg
agagaatcggagggagagagagacacagagaagacagaagctgagggtgatggagagaag
gagaaagagggtaaagagaacacagaggaggcacagagagaaggagagagtgaaggagag
agaaagaccaaagtggagcgagaggtcggggaggggaacctggccacagccgctgcctct
gctctggccgctgctgctgtcaaagccaagcaccttgcggcggtggaggagaggaagatc
aagtctctggtggctctgctggtggagactcaaatgaagaaactggagattaaactgaga
cactttgaagaactggaaaccatcatggaccgagagagagaggctttggagtaccagcgt
cagcagttgttggccgaccgtcagtccttccacatggagcagttgaagtacgcagagatg
agagcgcgacagcagcacttccaacagatccaacaccagcagcaccagacagggaccccc
cacggacccgcacccccagccggagccaccacgcccgggcaacagcagcagcagaccacc
tcctcctctagctccacaccagctcctccgcctgcccccagcccagcgccctctgcctcc
tctggcaccgcgacagagaccggcgcccctggagctcacaccaactccccctgcccccct
ggacacgccccacccaaccaccccagcgctggagccttgccctcactacatgagcaccat
ggccctcaccctggagagacccacccccccaacgctcccgtcccgccccctcagtga
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