Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110159584
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Entry
110159584 CDS
T05002
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110159584 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110159584 (gspt1)
03012 Translation factors [BR:
bpec03012
]
110159584 (gspt1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110159584 (gspt1)
Translation factors [BR:
bpec03012
]
Eukaryotic type
Release factors
110159584 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110159584
NCBI-ProteinID:
XP_020779811
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDPTDAPDSWELEEDAEAPTAAAELPAAFASLNVNAKPFVPNVNAPVFVPSFLQTSTVDM
PASEGTAEPVASMEVADTAAPVENGGTEADMTTEEETWEQKEEPGGGGGGGGQGDAAGKE
DEEMMEEEEEEMPVPKVAPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRT
LEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSF
VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP
TVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVPECSWYTGLPFI
PHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHTVEVLS
LLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFDAQIVIIEHKSI
ICPGYNAVLHIHTCIEEVQIAALICLVDKKTGEKSKHRPRFVKQDQVCIARLRASGVICL
ETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacccgacagacgccccggattcgtgggagctggaggaggatgccgaggccccgact
gcagcggcggagctcccggccgccttcgcctccctgaacgtcaacgctaaaccctttgtc
cccaacgtgaacgctccggtgttcgtgcccagcttcctccagaccagcaccgtggacatg
ccggcttcagagggtaccgcagagccagtggccagcatggaggtggcagacacagccgcc
ccagtggagaatggaggcaccgaggcggacatgacaacagaggaggagacgtgggagcag
aaggaggagcccggcggagggggcggaggcggggggcagggggatgccgctgggaaggag
gatgaggagatgatggaggaggaagaggaggagatgcctgtgcccaaagtggccccgccg
cctccagacgcccccaagaaggagcacgtcaatgtggtcttcatcggacacgtcgatgct
ggtaaatcaaccattggaggtcagatcatgtacttgaccggaatggtggacaaacgaaca
ttggagaaatatgagagagaagctaaagagaagaacagagagacctggtatttgtcgtgg
gccctggacacaaaccaggaggagagggacaaggggaagacagtggaggtggggcgtgca
tacttcgagacagagaaaaagcacttcaccatcctggacgcacccggacacaagagcttc
gtaccaaacatgattggaggggcatcacaggccgatctggcagtgctggtgatctcagcc
agaaagggcgagtttgagacgggctttgagaagggggggcagacaagggaacacgccatg
ctggctaaaactgccggagtcaaacatctcattgtcctcatcaacaagatggatgacccc
actgtcaactggagcctggagagatacgaggaatgtaaggaaaagctggtgccatttttg
aaaaaagtgggcttcaaccccaagaaggacatccactttatgccttgctctggactcact
ggtgccaacctcaaagacccggtgccggaatgctcctggtacacgggattgccatttata
ccccacctggacagcttgccaaatttcaccagatccagcgatgggcctgtcagactgcca
atagtagataagtataaggacatgggcacagtggtccttgggaaactggagtcagggtcc
atcagcaaagcccagcagctggtcatgatgccaaacaggcacacagtggaggtgctgagc
ctgctgagcgatgacgtggagacggacgacgccgccccgggagagaacttgaagctgcgt
ctgaagggcatcgaggaagaggagatcctgccgggcttcatcctctgtagccccgacaac
ctctgccactcagggcgcaccttcgacgcacagatcgtcattattgagcacaagtcaatc
atttgccctggttacaatgcggtgcttcacattcacacctgcattgaagaagtgcaaatc
gcagccttaatttgtctggtggacaagaagacgggagagaagagcaaacatcgcccccgc
tttgtgaaacaggaccaggtgtgcatcgccaggctgcgggcgtcaggagtcatctgctta
gagacctttaaggacttccctcagatggggcgcttcacactgcgagacgagggcaagacc
atcgccatcggtaaagtgctgaagctggtggcagaaaaggactaa
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integrated database retrieval system
