Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110159620
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Entry
110159620 CDS
T05002
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110159620 (mms19)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110159620 (mms19)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110159620 (mms19)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
110159620 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
RTP1_C1
TOR1L1_N
HEAT_ECM29
PORR
Motif
Other DBs
NCBI-GeneID:
110159620
NCBI-ProteinID:
XP_020779859
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MMAADSAVVLGLVEEFVSGLVDSKAKDAAAAVKDGQFTVLQLVEALGLSLTSSQPHTRAR
GVQLLSEVLNECSGSLTEKEVEVLIAFYENRLKDHYVVTPPVLQGLKALTKCTVLPPGSA
VSMLRSLFQDVHVQSLMLAERACVYNMLLNLMETREAELKSLGADFVFGFVQSMDGERDP
RNLLLAFQIASNIIYQGYDLGKFAEELFEVTSCYFPIDFSPPPNDPHGITKEELILALRS
ILTGTPKFAEFLLPLIIEKVDSDVQSAKLDSLQTLAACVSQYEHKDLAEFLEGLWTSIRR
EVFQTSSEKVESAGLSALTALTSCVSRSVLSSDSEDYLSNFLNLVIKDCKHHLSEPDLKL
VWPSAKLLQAACSASIRASHIITASVMPSLIEQYNTRTQCSHRRTLLEVVQKFVQSVKLV
NTPENEDNALSEYRSSLCSIVFSALSETNDSLQITATQVLTSLTQQQGLLEESDIELAVD
HLTKLLLTEEDERVCLAVVECIGALAVLHPEQFISKMIPRLRIEAFAVPMDENSLEAAKR
PSHQTVRQRCLTALASVSSQPSVVQQSTPVLLELISAAHTGSVPFTIEDVVLACRSLQRI
AEQVQDTEETGHCFHDIIIPRLLSLTLQAALQGEDAPRPSPLVEESVLSAMVLVIGTSCS
KLQPKLAEETASKAVSLFLNGNISFLPDNSFPSNIQLLKGDCWRQSQMVCLLMACVCSLP
RTVEVPQLDDLLFALEELSCSSSHTLSYTSAAKCFAGLVNKRSLGEALDRLIQRTVKRVC
SELDSPISTVHTQAFTLMIWVAKALLLRYHPLSTALTDKLFSLLDDAELGSLAADGFSLL
MSDSTDVLNRACHADVRIMYRQRFFSENSSKLVQGFHAATERKPNYLKALSNIVNKLPKQ
VQVTELPALLSLLLEALSCPDLSVQLSTLSCLEPVLVDPPPALIQQLEALVSRLLALTSS
PAMVVRIGSLRCIHALSHFPAHEILPFRARVLRALAKPLDDKKRLVRSEAVRARGEWFLL
GSPGGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcggacagtgcagtggtgctgggtttggtggaggagtttgtgtctggattg
gtagacagcaaggccaaggacgccgcagcagctgtcaaagatggacagttcacagttctg
cagctggtggaggcactgggcttaagtctgaccagctcccagccccacactcgagccaga
ggagtacagctgctctctgaagtcttaaatgaatgttctggaagtctcactgagaaagaa
gttgaagttcttattgccttctatgaaaaccgactaaaggaccattatgtcgtcacacct
cctgtcttacaagggctcaaagctctgacaaaatgtacagttttgcctcctggctcagct
gtgtccatgctgaggtctctatttcaagatgttcatgttcagtctctgatgctggcagag
agagcatgtgtttacaatatgctactcaacctgatggagaccagggaggcggaactgaag
agtttaggcgccgactttgtctttggctttgtccagtccatggatggagagcgggaccct
cgcaacctgctgctcgccttccagattgctagcaacatcatctaccaaggctatgaccta
ggtaaatttgctgaggagctgttcgaagtgacatcgtgttatttccccatcgacttcagc
cctccacccaatgacccccatggtatcaccaaagaagaactcatcttggcattgagatca
atcctgactgggacaccaaagtttgcagagttcctgttaccactcatcattgagaaagtg
gactctgatgtacaaagtgccaagttggactccttacaaactctggctgcctgtgtctct
cagtatgagcataaagacttagcagagttcctagaggggctgtggacatccattcgtaga
gaggtgtttcagacctccagtgagaaggtcgagtctgcaggtctctccgctctcaccgca
ctcacttcctgtgtctctcgctccgtcctcagctctgactctgaagactatctcagcaac
ttcctcaacctggttataaaagactgtaagcaccatctgagtgaaccagacctgaagctg
gtctggcctagtgccaagctgctgcaggcagcctgtagtgcctccatcagggccagtcac
atcattacagcctccgtcatgcccagcctcatcgagcagtacaacaccaggacacagtgc
tcgcaccggcggacattactagaagtggttcagaaatttgttcagtctgtgaaattagtc
aacacaccagaaaatgaggacaatgctttatcagagtaccgttcttcattgtgtagcata
gtcttctctgccctcagtgaaaccaatgacagtctacagatcacagccacgcaagtgctc
acttcactgactcaacaacaaggtctattggaagaatccgatatagaactggccgtggat
catctgaccaaactgttactaacggaggaagacgagagagtgtgccttgctgtagtagaa
tgcattggggctttagcagtattacatccagaacagttcatctctaaaatgattccacga
ctgaggattgaagcatttgcagtaccgatggatgaaaacagtttagaagcagctaaacgc
ccctctcatcaaaccgtccgtcagcggtgtttgacggctctggcctcagtctcctctcag
cccagtgtggtccaacagagcacgcctgtcctcctagagctcatctcggctgcacacaca
ggtagtgtccccttcaccatcgaggatgtggtgttggcatgccggagtctacagaggata
gcagagcaagttcaggacacagaggagaccgggcactgttttcatgacatcattatcccg
cgcctgctgtctctgacactacaggctgctcttcagggtgaagatgcacccagacccagt
cctttggtggaggagagtgttctgtctgctatggtcctagtcattggtacatcctgttct
aaactgcagcccaagttggcagaagaaactgcatctaaagcagtgtctctctttctaaat
ggcaatatctcctttttgccagacaattcatttccatcaaatattcaacttcttaagggc
gactgttggagacagtcccagatggtttgtctgctcatggcttgtgtgtgctctttacca
cgtactgttgaagtcccacagttggatgatctcctgttcgcactggaggagctgagctgt
agctcctcccacactctgtcctacacatcagcggctaagtgcttcgcaggcctggtcaac
aagaggtcactgggtgaagctctggacaggctcatacagaggacagtgaagagggtgtgc
tctgagctggactctcccatctccactgtgcacactcaagccttcactctcatgatctgg
gttgctaaggctcttcttcttcgataccaccccctgtcgacagctctgacggacaagctc
ttctctctgcttgatgatgcagaattgggttcactggcagcagacggcttttctctcctc
atgagcgactccactgacgtcctaaatagagcttgtcacgcagacgtacgcatcatgtac
cgacagcgctttttcagtgagaattcaagcaaactggtccagggcttccatgcagccaca
gaaaggaagccaaactacctaaaggctctgtcaaatatcgtcaacaaactgccgaagcaa
gtgcaagtgactgaactaccagcactcctgtcccttttgctggaggccctgtcctgtcca
gacctgagtgtccagttgtccactctgtcctgcctggagcctgtgctggtggaccctccc
ccagctctcatccagcagctggaggctttggtgagcaggctcctggccctcacgtccagc
ccagccatggttgtaagaataggatctctgagatgcatccatgctctgtctcactttcct
gcacatgagatactgccatttcgagctcgggtcctgcgggctttagccaaaccgctggat
gacaagaagaggctggtgcgaagtgaagccgtacgggccagaggggaatggtttcttttg
ggaagtcctggaggaaggtga
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