Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110159833
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Entry
110159833 CDS
T05002
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110159833 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110159833 (nup98)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110159833 (nup98)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110159833 (nup98)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110159833 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
110159833
NCBI-ProteinID:
XP_020780092
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MFNKSFGTPFGGGTTGGFGTSSTFGQQNTGFGATGGFGTSAFGATTNTGGLFGSAQNKPG
GLFGSTTFSQPATSSTSSGFGFGANTGTSTSLFGSTNTGTTGGLFSTNNNAFGANKPTSF
GSFGTSTSSVFGSANTTSNPFGPSSSLFGGSGFNATAQQPGTTVKFNAPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRMEDYQAGRKGPSNPMAPAAGSLFGANTATSSAST
GLFGASAPNTSFSFGGNKATFGTSTGGFGATTGTLFGQPQPQPAPSASLFKPFGQPTTTQ
STGFSFGNTASMGPANTSSMGLFGSTAPTQSGGLFGATQTTTSGFGTTTGLFGTNTGFGG
VGTQPSLFGNKTAGFGTTTTSAPSFGTGPSLFGSKPALTLGTGTNTSTFGFGANPAGGSL
FGTKPATGGLGTGLGTGFGAVVGAGQPSLFGNTQNKLGTTLGTMGTFGATGFNAGASSLG
FGAPQQPVALTDPSASAAQQALLQQQLSVLAYSPYEDSPLFRNPLSDPKKKEERLKPTNP
TAQKALTTPTHYKLTPRPATRVRPKALSSSGTSKSQLFDGLDDDEPALSNGAFVPRKSIK
KLVLKNLNSSQYSSPLSKETDDLASPPEYPQNGHSPSEEEEASREVAASSSRPEEDPEVT
QFYVNPIAKPIPQSRLHTSLQDTISDMNMHKASKTSLELSSEDVSASLGEESLQDDRDDE
QLEVQAPHPAGIVLTRAGYFTIPSLEELTEMVDSNGDCFVENFTVGRRGYGSVFFPGEVN
VAGLNLDDIVHFRRKEVIIYPDDKNKPPEGQGLNRRAEVTLDGVWPNDKTTCSQIRSPER
LSEMNYEGRLEKASRRQGARFLEYRPETGSWVFEVSHFSKYGLQESDEDEEVPLKLDPKK
LKTLGPVPPVGQQQGAPQTQSTVVVEPCAPPALELDSDMADITQPLPSESPDEQEVSGGD
IGQSEHAAISGSAHIATSLGINPHTLQIMKASLFAEEEEEEAAVDVFVEPRLKFSDVSSP
RVQGRPSVGGLLQSRFLAQLSESPRSPSLPHPSVPRPLAAPALWTPPKSLAPPSLPSLPS
LPSLPSRHQESLNIRTVGAKRLGGPVPLKESVTYNKGSLLMDAGLFRGRSFRVGWGPGWT
LVHSGQTLSSESKVLDKDLDYSFLPRPTHKTLSESPYKVSVEQVQGPDSGLDLGLDSSEA
QELREAVLERPLEICLKHSRIVSSERCPFVQPQSGVAALHEYAQWAAEVSERHGSAQPVL
NDWREAWTLCEALWGRLSPSDPDLDQDSGQDPPIGEYQQQLLRRRAFSSWLAQGALCRVE
REVSLSQDRHADAIFSLLTGNCISQACQFAQKHGDHRLSLLLSQALGSQFCRELLALQLA
DWHRMGTDSYVSEERLRIFTLLAGKPVWESSDSSVNVCSELDWKRCLAVHLWYMLPPTAS
VSDALKRYQDAFQGCSDGVRYACPPLPPYLESECLDLDDEDSDKRPLYDLCFHLLKLYSD
RHHPLHPLLDPLTLSPHRLDFRLSWLLWTVLDALNYTHLPESSLGQLHLSFCSVLEREGL
WHLGVFVLLHIHNPSERERAVRLMLQLHCPLEDTEESLRREHFLTQTLLIPESWIHQAKA
LRAKSLNDTRRQALHLYRAGEWSQCHRTLTRHLASDCIINDNLDFLLEFLEGLSVPERSA
VIQDWDSSGRLFLDYIRVLKTLQHIQQSEGGDSGYELERLYTDVTSLCGRIELLQCFCAK
DRLAQSEMAKRLANILRVVVSLQLGDSPEGGAPLVHVAPHISRLPMPEDYTLEELRGLTQ
SYLRQLVLSQ
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttgggactccgtttggaggaggcaccaccgggggcttcggcacc
tcctccacctttggacagcagaacacaggctttggggcgaccggaggctttgggacgtcg
gcttttggagcaacaaccaacaccggagggctgttcggctccgcgcaaaataaacctgga
ggtctgtttggctccaccaccttcagccagcccgccacctcctccaccagctccggcttc
ggcttcggggccaacacgggcacctccaccagcctgttcgggagcaccaacacgggcacc
accggaggcctcttctcgaccaacaacaatgcgtttggagccaacaaacccacttccttc
ggcagttttggcacaagcacgagcagcgtgtttggttccgccaacactacgtccaacccg
ttcggtccctccagctctctgttcggaggctcggggttcaacgccacagcacagcagccc
gggaccaccgtcaagtttaatgctccgaccggcagcgacacgatggtgaaggccggcgtg
accacgagcatcaacaccaaacaccagtgcatcaccgccatgaaggagtacgagaacaag
tccctggaggagctgcgaatggaagattaccaggccggtaggaagggtccgtccaacccc
atggccccagctgcgggttctctgtttggggcaaacaccgccacctccagcgcctccact
gggctgttcggcgcctctgcccccaacaccagcttctcctttgggggtaacaaggccacc
tttggcaccagtacaggaggattcggcgccaccacggggactctgtttgggcagccgcag
cctcagccggcaccgagcgccagcctcttcaaacccttcggtcaacccaccaccacgcag
agcaccggcttctccttcgggaacaccgcctccatgggaccggccaacacctccagcatg
ggcctgtttgggagcactgcccccactcagtctggaggtctgtttggcgcgactcagacc
accacctccgggttcggcaccaccaccggcctcttcgggaccaacacaggctttggcggc
gtgggcacgcagccgagtctgtttgggaataagacggcaggctttggcaccaccacaacc
agcgctccgtcatttggcaccggccccagtctgtttgggagcaaaccggctctgaccctg
ggcactggtacaaacacatccacgttcggctttggcgcaaacccggctggaggaagtctc
tttgggaccaaacccgcgactggaggcctgggcactgggctgggcaccggcttcggagca
gtggtgggggcaggacagccatcgctctttggaaacacacagaacaaactgggcacgacc
ctgggaacaatgggaacgttcggagcgaccgggttcaacgctggagccagcagcctgggc
tttggagcgcctcagcagcctgtggcccttaccgaccccagtgcgtcggccgctcagcag
gctttgctacagcagcagctcagtgttctggcctattctccgtacgaagactctcctctg
ttcaggaaccctctgtccgaccccaagaagaaggaggagcgcctgaaaccgaccaatcca
acagctcagaaggccctgacgacgcccactcactacaaactgaccccgcgtccggccacc
agggtgcgacctaaagccctgtcctcgtctggaacctccaagtctcagctgttcgacgga
ctggacgatgatgagcctgcgctttccaacggagccttcgtcccaaggaagagcataaag
aagctggtgttgaaaaacctgaacagttctcagtacagcagtcccctgtccaaagagacg
gacgacctcgcctcgcctccagagtacccccagaacggacacagcccgtcagaggaggag
gaagcgtctcgggaggtggcggcctccagctctcgcccggaggaggacccggaggtgacc
cagttttacgtgaaccccatcgccaaacccatcccccagagcagactccacaccagccta
caggacaccatcagcgacatgaacatgcacaaagcctccaagaccagcctcgagctgagc
agcgaggacgtgtctgcgtctctgggggaggagtctcttcaggacgatcgggacgacgag
cagctggaggttcaggctccgcatcctgcaggcatcgtgctgactcgggcgggttacttc
accatcccgtctcttgaggagctgactgagatggtggactcgaacggagactgttttgta
gagaacttcaccgtgggcaggagagggtacggctctgtgtttttccctggagaggtgaac
gtggccgggctcaacctcgacgacatcgttcacttcagacgaaaagaagtgattatttat
ccagatgataagaacaagcctccggagggacagggcctcaacaggcgagcggaggtgact
ctggacggagtgtggcccaacgacaagaccacgtgttctcagatccgcagccccgagcgc
ctctcagagatgaactacgaggggcgtctggagaaggcctcccgcagacagggggcgcgc
ttcctggagtacaggcccgagaccggctcctgggtctttgaggtctctcacttttctaag
tacggacttcaggaatcagacgaagatgaggaagtgccgctcaaactcgacccgaagaaa
ctcaagaccctgggccctgttcctcctgtgggccagcagcagggggcgccgcaaacacag
tccactgtggtggtggagccctgtgcccccccggcgctcgagctggacagcgacatggcc
gacatcacgcagcccctcccctcagagagcccggacgaacaggaagtgagcggcggcgac
atcggccagtcggagcacgccgccatctcaggctccgcccacatcgctacgtccctggga
atcaacccccacacgctacagatcatgaaggcgtctctgttcgcggaggaggaggaggag
gaagcggctgtggacgtgtttgtggagcccagactaaagttctctgacgtgtcatctcca
cgagtgcagggacggccctcagtgggaggacttctacagagtcgattcctggctcagctc
tcagaatctccacgctccccgtccctccctcacccgtctgtgccccgccccctcgcggca
cccgctctctggacgcctccgaagagtctggctcctccctcgcttccctctctcccgtct
ctcccctcgctcccctctcgacatcaggagagcctcaacatcaggactgtgggcgcgaag
agactgggaggacctgtgcctctgaaggagtctgtcacgtacaacaagggctctctgctg
atggacgccgggttgtttcggggccgctccttcagggtgggctggggtcctggttggact
ctggttcactcgggtcagaccctgagctccgaatccaaagtcctggacaaagacctggac
tacagcttcctgccaagacccacgcacaaaaccctctcggagtccccttacaaagtgtcc
gtggagcaggttcagggtccagactctggtcttgatttgggtctggactcttctgaagcc
caggagctgcgtgaggccgtgttagagcgccccctggagatctgtctgaagcacagcagg
atcgtgagctcggagcgctgtccgtttgtgcagcctcagagcggagtggccgcgctgcac
gagtacgcacagtgggcagcggaggtcagcgagaggcacggctccgcccagcctgttctg
aacgactggagagaggcctggactctgtgtgaggctctgtggggccgcctgtcgccttca
gacccggacttggaccaggactcgggccaggacccccccataggagagtaccagcagcag
ctcctccgacgccgcgccttctcctcgtggctggctcagggcgccctctgcagggtggag
cgggaagtatctctttcccaggacagacacgcggacgccattttcagtctcctcacggga
aactgcatcagccaggcctgccagttcgcacagaaacacggagaccaccggctctccctg
ctcctctcccaggctcttggctctcagttctgcagggagctgttggcgctgcagctcgca
gactggcaccgaatggggacggacagttacgtgtcggaggaacgtctccggatcttcacg
ctgctcgctgggaaaccagtgtgggaatcctcagactcctccgtaaacgtgtgctcggag
ttggactggaagcggtgcctggccgtccacctgtggtacatgctcccgcccaccgcctcc
gtgtccgacgccctcaagcgctaccaggacgccttccagggctgttctgacggggtgagg
tacgcctgcccccctctccctccgtacctagagtccgagtgtttggacctggacgatgag
gattcggacaagcgacctctgtacgacctctgcttccacctgctgaagctctacagcgac
aggcatcaccctctccaccctctgctggaccctctgaccctgtctcctcacagactggac
ttcagactcagttggctcctgtggacggtgctggacgctctgaactacactcacctgccg
gagtcgagtctggggcagctgcacctctccttctgctctgtgctggagcgagagggactg
tggcacctcggggtctttgtgctgctgcatatacacaaccccagtgagcgggagcgtgcc
gtgcgtctgatgctgcagctgcactgccccctggaggacacagaggagtcactgcggcgg
gagcacttcctgacccagactctgttgatcccagagtcgtggatccatcaggccaaagct
ctgagggccaagagcctcaacgacacccggcggcaggcgctgcacctgtacagggcaggg
gagtggagccagtgccaccgcaccctcacccgccacctcgcctctgactgcatcatcaac
gataacctggacttcctgctcgagttcctggagggcctcagtgtccctgaacgcagcgcc
gtgatccaggactgggactcctccgggagactgttcctggactacatccgggtcctgaag
actctgcagcacatccagcagtctgaagggggcgacagcgggtacgagctggagcgtctc
tacaccgatgtcacgtctctgtgcgggagaatcgaactactgcagtgcttctgcgccaag
gaccgcctcgcccaatcagagatggcgaagcgtctggcgaacatcctgcgcgtggtggtg
tcgctgcagctcggcgactctccggaaggcggcgcccccctggtccacgtggcaccgcac
atcagccgcctgcccatgcccgaagactacacgctggaggagctgagggggctcacccag
tcgtacctgcgccagctcgtcctcagccaatag
DBGET
integrated database retrieval system
