Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110160293
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Entry
110160293 CDS
T05002
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110160293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110160293
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110160293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
110160293
NCBI-ProteinID:
XP_020780582
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MISRKRLERRRAELPHCACPAAVRSSSGDYPFPGIYGTAAECVSFRARFELLDDTQEATL
PCSPLHNQTHGLLLLIFLVDHNQAKSDKMPVSRMRMRPWLEKMIDSNTVPGLHWVDKDRT
MFSIPWKHAARHGWELDKDASLFKEWAIHTGKYVQGQTSDPKTWKANFRCAMNSLPDIEE
VKDKSVNKGHQAVRVFKLLPVTLKGREKRNRIAKRRRNTKVKCEEESSDSDCVPSPMQST
HIPSPQDSRVDSTMQPEPHVPELPDWMTLDTGFTRHFEVSPSHSTLGPEDDDIIEICAQW
ERERLSWMPSGLSNNGFLTNEPQCTSPGSQYSESSSADEFDEHPKYTTLGTTFLSNDYSF
TPFSLF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccgtaaacgtctagagcgccgacgagctgagctgccccactgcgcatgcccg
gctgctgtgcgctccagcagcggggattacccatttcccggtatatatggaacagcggca
gagtgcgtctccttcagagcgagattcgaactcttggacgatacacaagaagcgactctc
ccctgctcaccactacacaaccaaacacacggactattgctacttattttcctcgtggat
cataaccaagcgaagtctgacaaaatgccagtttcaagaatgagaatgcgcccatggctg
gagaaaatgatcgactccaatacagttcccgggctacactgggttgacaaagacaggacc
atgttctccattccctggaagcacgcggcgagacacggctgggagttggacaaagacgca
tcgcttttcaaagagtgggccatccacacaggtaaatatgtgcagggccagacgagcgac
cccaaaacctggaaagcaaacttccgctgtgcgatgaactctctccctgacatcgaggag
gtcaaagacaaaagcgtcaacaaaggtcaccaggccgtgcgggtgttcaagctgctgccg
gtcaccctcaaaggcagagagaagagaaacagaatagccaaacggaggaggaataccaaa
gtgaaatgtgaggaggagtcgagcgacagcgactgcgtgccctccccaatgcagagcaca
cacatcccctccccacaggacagccgggtggacagtaccatgcagccagagcctcacgtc
cctgaactccctgactggatgacgttggacactggtttcactcggcatttcgaagtctca
ccaagtcacagcacattaggcccagaggacgacgacatcatcgagatttgcgcgcagtgg
gagagagagaggctgtcctggatgccaagcggtctaagcaacaatgggttcctgaccaat
gaaccgcaatgcacaagtccaggaagtcagtacagcgaatcgtcttcagccgacgagttt
gatgaacacccaaagtacacaaccctcggcaccaccttcctgtcaaacgactacagcttc
acccccttttctctcttctga
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