Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110160562
Help
Entry
110160562 CDS
T05002
Symbol
exosc2
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110160562 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110160562 (exosc2)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110160562 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110160562 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
110160562
NCBI-ProteinID:
XP_020780885
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MADMRLPTVRKPLTLSGSFFDRKDLVVPGDVITTDTGFMRGHGTYVDEEKLTASVAGEVQ
RVDKLICVSPLKTRFNGEVGDVVVGRITEVWXKKWKVETNSRLDSVLLLSSVNLPGGELR
RRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIKR
QKTHFHNLPCGASIILGNNGFVWLYPTPAQQEEEAGGFYTSLEPVNLSDREVISRLRNCL
LALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVMEEVVLLTQQKLLEHEC
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatgagactaccaactgtgcgaaaaccattgactttatcgggttcttttttt
gatcggaaggatctggtggtgcccggcgatgtgataacaacagataccggttttatgagg
ggtcatggtacttatgttgatgaagagaaattgactgcgtctgtcgctggagaggtgcag
agagttgacaagttaatttgcgtcagccctctaaaaaccagattcaatggggaggttgga
gatgtggttgtagggagaataacagaggtatggtaaaaaaaatggaaagtggaaacaaac
tcccgattggactctgtactcctgttgtcatcagtgaatctgcctggtggagagctgagg
agaaggtcagcagaggatgagctcaccatgagagaatatcttcaagaaggagatcttatc
agtgcagaagtgcagtcagttttttctgatggggcattatcacttcatacaagaagttta
aaatatggaaaacttggtcagggtgtattagtgcagctttcaccctcattgatcaagaga
cagaagacacattttcacaacttgccatgtggtgcatccattattcttggtaacaatggg
tttgtctggctctaccccactccggcacaacaggaagaggaagctggaggtttttacacc
agtttagagccagttaacctctctgatagagaagtgatttcaagactaaggaactgtctt
ctagctttagctgcacacaaagttcttctttatgacacaagtgtgctgtattgctatgaa
tcttctcttcaacaccaggtgaaagacatcctaaagccggaagtaatggaggaggttgtg
ttgttgacacagcagaaacttttggaacatgaatgttag
DBGET
integrated database retrieval system
