Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110160756
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Entry
110160756 CDS
T05002
Symbol
sympk
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
bpec04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110160756 (sympk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110160756 (sympk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110160756 (sympk)
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110160756 (sympk)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110160756 (sympk)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110160756 (sympk)
U7-dependent histone pre-mRNA processing factors
110160756 (sympk)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Motif
Other DBs
NCBI-GeneID:
110160756
NCBI-ProteinID:
XP_020781091
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MNFIEEEEVSQKAKVPPKNIDMTTSEKVVELLNQAALIPTDEKLTVLKQVQELIINKDPS
LLDNFLDEMIAFQTDKSIEVRKFVIGFIEEACKRDNELLLRLIANLNMLLRDDSVNVIKK
GILTLTQLYKVSLQWLVRSKVISEMQEACWDMLTNMKGEVLELLDSENDGVRTHAIKFTE
ALIIALSPRTPESEVPKRQENDISLDKVPKDHSYIRYDALCEEGKTALEKLLKFMVHPAI
SSINLTTALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVAV
LKHPCSLEFHGQISTLLQDLGMPQSEIARSTPALREQRKRPRHEQYTEGKKVKIEPTLID
EDEDKEEPPPPVPKPAPAPVAQSAIDLTAEFLRPLLTPDNVANLVLISMVYLPDVMPASF
QSTYTPVESAGTDAQIKHLARLLSTQMTAAGIGPGLEQSKNKETAEEEGSSKDPLIKRKS
QMMVQNISVVGVHTEKTPEIPVLKRLPEPILPSAQTKISGASGRKKVFRLSDVIQPLTDT
QLESLSSKAVRRILHSEKSIAQSGMSQVRVKLLSRLVTQFEGMMKGDVLDFILEDIRTRS
DLAFSLLYQEYTTYLSQMPSGLLDSYDHCLYTLLSGLQEKPEQRDGLFTKLVLEAPIITD
SALEVIRRYCEDESRVYLGMTTLKELIFNRPSRQFQYLHVLLDLSSHEKEKVRTTALSFL
KRMYEKEHLRDYIEKFALNYMQLLVHPNPPSLLFGADKDTEVAAPWTEETVRQCLFLYLS
LLPLNHRLVHELAAVYTEAIADIKRSVLRAIEQPIRGMGMNSPDLLLLVENCPKGAETLV
TRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKSEVIQALPKLIKLNPI
VVKEVFNRLLGTQHSEGTSSVSPLTPGDLLIALHNIDSTKCDMKSIIKATNLCFGEKNVY
TSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIAKQVWKYPKVWE
GFVKCCQRTRPQSYTVLLSLPPAQLSSVFERCPEMRDPLLQHVLSFTPHQQAHIPASIMA
VLEAHKKPEPKPVEPEKEIEPVLKPATAEPQSTSMPEPEHNERQQEEEEPMEQEEQESVN
RAGQMETAAAQESASPHPETEEPVDDTHPEPSDPQQGGQDGEAENGDEVEE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcatagaggaagaagaggtctcccaaaaagcgaaagtccccccaaagaatatt
gacatgaccaccagtgaaaaggtggtggaacttctaaatcaagcagcgcttattcccaca
gatgaaaagctgactgtgctcaaacaggtccaagagcttatcatcaacaaagacccatct
cttcttgataattttcttgatgagatgattgcatttcaaactgacaagtccatagaagtt
aggaagtttgtcattgggttcattgaagaagcttgtaagagagacaatgagctcctcctc
aggctgattgctaacctgaacatgctgctgagggatgacagtgtaaatgtgataaagaag
ggcatcctcacactcacacagctctacaaagtctctctacagtggctggtgcgatctaaa
gtaatctcggagatgcaggaggcatgctgggacatgctcactaatatgaaaggagaggtg
ctggagttattggactctgaaaacgatggtgtcagaactcatgccattaaattcactgag
gctttgatcatcgccctgtctccacggacaccagagtcagaggtccccaagcggcaagag
aatgacatcagtttggacaaagtacccaaagaccactcctacatccgctatgatgctctc
tgtgaagaggggaagaccgctctggagaagctgctgaagtttatggtgcatccggccatc
tccagcatcaacctgacaacagctctgggctcgctggccacaatcgcccgacagaggccc
atgttcatgtccgaggtggtacaagcctacgagactctgcatgcaaacttgccccccact
ctggcgaagtctcaggtgagcagtgtgcgcaagaacctaaagctccacctggtggccgtt
ttgaagcacccgtgcagtctggagttccatggacagatcagcactttgcttcaggaccta
ggaatgcctcagagcgagatcgcccgctccactcctgccctccgagaacaacgcaaacgc
ccccgacacgagcagtacacagagggcaagaaggtcaagatcgagccaaccctgatagat
gaggatgaggataaggaggagcccccccctcctgtgcccaaacctgctcctgctccagtc
gctcagtcagctatagatctcacagcagagttcttgcgccccctactgacccctgacaac
gttgccaacctggtgttgatcagtatggtgtacctacctgatgtgatgcccgcctctttc
cagtccacatacacgcccgtcgagtctgcaggcacagatgctcagatcaaacatttggct
cgactcctgtccactcagatgactgctgcagggattggtccaggtcttgagcagtccaaa
aacaaagagacagcagaggaagagggcagcagcaaagaccctctgatcaaacgtaaatct
cagatgatggtgcagaacatttctgtggtgggggtacacacggagaaaacacctgagatc
ccagtgctaaagaggcttcctgaacccattctgccctctgctcagaccaaaatctcaggt
gcgagtgggaggaagaaggtcttccgtttgtctgatgtgattcagcctctgaccgacact
cagcttgaaagcctgtcgtctaaagccgtcagacgcatcctgcactcagagaagtccatc
gcccagagcggcatgtcccaggttagagtgaaactgttgtcccgtctggtgactcaattt
gagggaatgatgaagggggacgtcctggattttatcttggaggacatccggactcggagc
gacctggcgttttctctgctctatcaggaatacaccacatatttaagccagatgccctcc
ggtctgctcgacagctatgatcattgtctttacactctgctgtctgggctgcaggagaaa
ccagagcagagggacggacttttcaccaaactggttttagaggctccaattattacagat
tctgctttagaagtcatacggcgatattgtgaggacgagtctcgagtttatttgggaatg
actaccctaaaggaattgattttcaaccggccttcacggcagtttcaatatcttcatgtg
cttttggatcttagctcacatgaaaaagagaaagtgcgcacaacagccttaagtttcctg
aagagaatgtatgaaaaagagcatttgagagactacattgagaagtttgccttgaactac
atgcagctcctggttcatcccaatccaccctctctgctatttggggctgacaaagacaca
gaggtggctgccccctggacagaggagacagttcgtcagtgtctgttcctgtatctttct
cttcttcctctcaaccatcgtctggtccatgaactcgccgctgtttacactgaggccatt
gcagacatcaaacgcagcgtcctcagagctatagagcagccgattcgtggaatgggcatg
aactctcctgatttgctgttattggttgaaaattgtccaaaaggagctgagacacttgta
acacgctgcctccatattctcactgacaaagttcctccatctccagagctggtagagagg
gtgcgcgatctttaccacaagagggtgccagatgtgcgctttttaatcccagttataaac
ggcttggaaaagagtgaagttatccaggcccttcccaagttaattaaactcaacccaatt
gtagtgaaagaagtattcaaccggttattaggcacacagcacagtgagggcacttcatct
gtttctcctctcactcctggagacctgctgattgctttacacaacatcgactcaaccaaa
tgtgacatgaaatctattataaaagctaccaacctgtgttttggagagaagaacgtttat
acctcagaggttttggcagtggtgatgcagcagctgatggagcagaaccctctcccaatg
ctcctcatgagaactgtgatccagtctctcaccatgtatcccagactgggcggcttcgtc
atgaacattttatcaagactcattgctaaacaggtgtggaagtaccctaaagtatgggag
gggtttgtgaagtgctgtcagaggaccagacctcaatcctacacagttcttttgtctctt
cctccggctcagctcagcagtgtgtttgaacgctgccccgagatgcgagacccactactg
caacatgtgttgtcatttactcctcaccagcaagcccacattcctgcatccatcatggct
gttctggaggcgcataagaaacctgaacccaaacctgtggagccagagaaagagattgaa
ccagttcttaaacccgccacagcagagcctcagtctacctcgatgcctgagcctgaacat
aacgaacgtcagcaagaagaagaggagcccatggagcaggaggagcaagagagtgtcaat
agagctggacagatggagacagcagcagctcaggagtctgcctctcctcacccagagaca
gaggaaccagtggacgacacacatccagagccctcggaccctcagcagggagggcaggat
ggagaggcagagaatggcgatgaagtagaagaataa
DBGET
integrated database retrieval system
