Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110160762
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Entry
110160762 CDS
T05002
Name
(RefSeq) collagen alpha-3(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04518
Integrin signaling
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110160762
04518 Integrin signaling
110160762
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110160762
09142 Cell motility
04820 Cytoskeleton in muscle cells
110160762
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110160762
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110160762
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110160762
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110160762
Hyaluronan
Extracellular matrix or blood plasma proteins
110160762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
110160762
NCBI-ProteinID:
XP_020781098
LinkDB
All DBs
Position
Unknown
AA seq
2785 aa
AA seq
DB search
MQHRVLLLCTLLGLLLIGLPPNLKAQDALAVGQRDIIFLLDTTMGATLLNAARDFIRRFV
SSMPIGPDQVQVGIAQFSTNTQIEMDLNTHGSRDALVAALGRLRTRPGQTVNIGAALDFV
RTNMIRPDKGSRLRQGVPQLVLLMTTKRSSDSVDEAARALQQMGVLTLAAGSKAADEEEL
KRIAFTDSVAFMLRDFRVLLRNPRIITDTLSSLSGTVVTEGPTETIVEITTVETRKVVRD
FVFLVDGSNYVGATNFPYVRDLIINIVNQLDVRPDRVQIGLLQYAEDPKIEFYLNSYSSR
EDVVNKTNQLSLLGGSVLNTGKALDYAFKNMFKPSTGSRRRQGVQQVLVLITGGPTQDSV
KTVADQMALAGVLTFTVGSGQADVSMLNSVAFVPDLAYHETYFSNLPALSEQMLPKLTIV
VGDTSTVTTFPGEIALAVGQRDIIFLLDTTMGATLLNAARDFIRRFVSSMPIGPDQVQVG
IAQFSTNTQIEMDLNTHGSRDALVAALGRLRTRPGQTVNIGAALDFVRTNMIRPDKGSRL
RQGVPQLVLLMTTKRSSDSVDEAARALQQMGVLTLAAGSKAADEEELKRIAFTDSVAFML
RDFRVLLRNPRIITDTLSSLSGTVVTEGPTETIVEITTVETRKVVRDFVFLVDGSNYVGA
TNFPYVRDLIINIVNQLDVRPDRVQIGLLQYAEDPKIEFYLNSYSSREDVVNKTNQLSLL
GGSVLNTGKALDYAFKNMFKPSTGSRRRQGVQQVLVLITGGPTQDSVKTVADQMALAGVL
TFTVGSGQADVSMLNSVAFVPDLAYHETYFSNLPALSEQMLPKLTIVVGDTSTVTTFPGE
IEGRDVAFLIDGTDSVRADFPYIQDFIIKVIEPLEVSADKVRIAVVQHSERPQATFYLNT
YQTKDEVVRAISNMRVVGGRSLNTGSALAFMKNTVLSERQGSRAAQGVPQFLIVLSASRS
RDSVKESAGALKTDGVVPFGVGVKDADPRQMEAISHNPSFAFKVKDFSELNTVPGRLNTY
VNLPKEELQVVLQQVHTSDAVKKDIVFLLEGSDNTRNGFPQIQQFVKSIVERLSIDDGKD
RVAVVQYADTPTVEFHLSTYKDKSNLMGAIDKLRHKGGTDVNSGAAMRFTRLMVFTSSWG
SRRLEGVPQILVVLTSQPSDDNIKTPAFALKEHEIMAVGVGVGDADRPELEVIAFKPNMV
YMVNDYGMLSQIQSHVIPTLDLKKDTKEALNGISDLVVDTGGDRRDIVFLVDGSDDSRNG
LPAIREFIRRMVEDIEDEVIRVAVVQYSDDTKACFNLNSHKTKSAIVYAVRGLRHKGGTS
RNTGLALKFVHDHVFTPLSGSRKLEGVPQILILLTGGKSRDDVSQTALKLKQMGVLIFAI
GMKNAQQEELGLIASFPKSLYNFPVIGELLSVQPEIATFIQDEVHSFTPNVELESAQRDI
VFLLDGSDETLGMFPMMQHFVQSMVESLNVGENTDRVSVVQYSDQPETEINLNTYFDKQD
VLEAVQNMIHMGGEGRSTGAALEYVKKDVFTSTMGSRNQDGVPQILVLLTGGKSSDDVTN
AAAALKQERVMPFCVGTRNADILELQNIAHIPSYTFTVPQFDTGSTPQQLVSLIKKVPRQ
PRQIPETVIRSGSPDFLLQSMQRDFVFLLDTSDETLTEFDSMIGFVKTIIQSVNVQRNND
RVALVQYSAEPSVNFYLNSYQTYETVTEALHNVRHKGGRARNTGKAIQFVKDNVFTSSSG
SRHQMAVPQVLVLITGGRSSDDFRNAVASLKAMGVIVFVLGTKKADVLEMQSVSHKPEYA
LIATDPRELSGIEQLIKSATQKVEASAIRPPSIDITDNIKRDVLFLLDGSDDSRAMFEDI
KDFVKYILPELNIGPNEDRVAVVQFSNTTQTEFDFNKYSTSDDIGKAVTALKHKRGYPHY
IGQALQHVKDNMLTTGSGSRIDEGVPQILILIYGGRSQDDIRTPAKMLKETGVISIAIGT
SDADTIELQTIAHEPKYALSIDDYEEIISIRQQVLSLMNAHSVQPIAPTKVIDHKKSDVV
FLIDGSYDSRNGFEQLRNFIKTTVETMNIDDNQDQVAVVQYHRDPTANFYLNSYSSKNDV
LSSVRTMRHKLGRPLNLGKALEFVRSNVFAAEVGGRRDQMVPQYLYVFSGGRSSDDVRGA
AQSLRDNGIKTVSIGTSNADTLEMQTVAHTPAHYISVSNFNNLQNLNQRIEAVLSGIPES
TEFPPVVEISSIRLSELQIADIVFLLDGSKDMLPSEKPIWNFIMGFVEQLEIGPSRMQVA
LIEYNTQPTVHFSLNRYSSRDDVLHYLKYTELSGRPNVNLGAALDYVRTNVFTAASGSRA
MHGVPQILIIVTSRKSDDDIVGPLGRLQKTGTVTYSIGINNADRMEVEQLAHSPETKYLD
VSDFTQVREQILSGKTTHGKPLYPSLGSRSIMKRDVVFLIDGSDDVRNKFSSMRDFVAKV
VTTFEIDDGKDRVAVVQYSSKAEQSFSLNTYTTREEVLRNIANLKPKGGRPQYIGAALQH
VIDKVFISNAGSRKNEGAKQILIILAGGRSRDSPRGPATALKAAGVEMYALGSKTANSQE
MQMIASNPNYTYSVPDFVNLPLVHQSLVAYLSQYEEVEDVKIVNIGENTDHVSVVQYSRD
AEVSFYLNTHDTRDDVLGAVRGLRHRGGRPLNTGAALQYVRDNVFTNSAGSRSLQGVPQM
LILLNGGRSFDDAETPAAALRDKGIIVFGIGAGRAAGAEMKNIAYDPSYAVSVSDFSDLP
NVQEQLSSVMSTTVVQVTTITPNVT
NT seq
8356 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacagggtcttactgctctgtacccttctgggtttactgcttataggactcccc
ccaaacctcaaagctcaggatgccttggctgttggacaaagagacataattttcctcctt
gacaccactatgggtgccaccctgctcaacgccgcccgtgacttcattcggcgttttgtc
agctccatgcccattggtccagaccaagtccaggtcggtattgcccaattcagcactaac
acccaaatcgagatggacttgaacacccatgggtcccgggacgctttggtggctgcactg
ggacgtttaagaacgagacctggccaaaccgtcaacataggagcagcgttggattttgtg
aggacaaacatgattagaccagacaaaggcagtcgtcttcgccaaggggtgccccaactt
gttctgctcatgaccacaaaaagatccagtgatagtgtggatgaggcagccagagcactc
cagcaaatgggggttttaactctggcagctgggtcaaaagcagccgatgaagaggagctg
aagagaattgctttcactgacagtgttgcgtttatgctgagggatttccgtgtcctgttg
agaaatccaagaatcattacggatactctttcgtctctgtctgggactgttgtgacagag
ggacccacagagacaattgtggaaataacaacagtggagacacgaaaagttgtcagagac
tttgtattcctggtggatggctctaattatgttggtgccactaactttccttacgtgcgg
gaccttatcatcaacatagtaaaccagctggatgtccgtcctgatagagtgcaaattggc
ctcctccaatatgcagaggaccctaagattgaattctacctgaacagctacagcagcagg
gaggatgtggtgaataaaaccaaccaactgtcactgcttggagggtctgtccttaacact
ggaaaagccttggactatgctttcaaaaacatgttcaaaccatctacagggtcacgaagg
agacagggcgtccaacaagtcttggtactcatcacgggtggaccaacacaggattcagtt
aaaactgtggctgatcagatggctctagcgggagtgcttaccttcactgttggttcaggg
caagctgatgtcagtatgttgaacagcgtggcctttgttccagacctggcctatcacgag
acctacttctcaaatttaccagccctgtcagagcaaatgctccctaaactgacaatagtg
gttggggacactagtacagttacaacattccctggagaaattgccttggctgttggacaa
agagacataattttcctccttgacaccactatgggtgccaccctgctcaacgccgcccgt
gacttcattcggcgttttgtcagctccatgcccattggtccagaccaagtccaggtcggt
attgcccaattcagcactaacacccaaatcgagatggacttgaacacccatgggtcccgg
gacgctttggtggctgcactgggacgtttaagaacgagacctggccaaaccgtcaacata
ggagcagcgttggattttgtgaggacaaacatgattagaccagacaaaggcagtcgtctt
cgccaaggggtgccccaacttgttctgctcatgaccacaaaaagatccagtgatagtgtg
gatgaggcagccagagcactccagcaaatgggggttttaactctggcagctgggtcaaaa
gcagccgatgaagaggagctgaagagaattgctttcactgacagtgttgcgtttatgctg
agggatttccgtgtcctgttgagaaatccaagaatcattacggatactctttcgtctctg
tctgggactgttgtgacagagggacccacagagacaattgtggaaataacaacagtggag
acacgaaaagttgtcagagactttgtattcctggtggatggctctaattatgttggtgcc
actaactttccttacgtgcgggaccttatcatcaacatagtaaaccagctggatgtccgt
cctgatagagtgcaaattggcctcctccaatatgcagaggaccctaagattgaattctac
ctgaacagctacagcagcagggaggatgtggtgaataaaaccaaccaactgtcactgctt
ggagggtctgtccttaacactggaaaagccttggactatgctttcaaaaacatgttcaaa
ccatctacagggtcacgaaggagacagggcgtccaacaagtcttggtactcatcacgggt
ggaccaacacaggattcagttaaaactgtggctgatcagatggctctagcgggagtgctt
accttcactgttggttcagggcaagctgatgtcagtatgttgaacagcgtggcctttgtt
ccagacctggcctatcacgagacctacttctcaaatttaccagccctgtcagagcaaatg
ctccctaaactgacaatagtggttggggacactagtacagttacaacattccctggagaa
attgagggaagagatgttgccttccttattgatggcacagacagtgtgcgggcagatttc
ccatacatccaggattttatcattaaagtcattgagccacttgaagtaagcgctgacaaa
gttcgaattgccgttgtccaacacagcgaaaggccacaagccaccttttacctaaacact
taccagaccaaagatgaagtggtacgagccatcagtaacatgagagtggttggtggtcgc
agtctcaacactggctctgctttggcattcatgaagaatactgtgctgtctgaaaggcag
ggaagcagagctgcacagggcgtaccacaattcctcattgtactgtccgcgagcaggtct
agagacagtgtgaaggagtctgcgggggcactaaagactgatggagtggtgccttttggg
gtcggagtaaaggacgcagacccaaggcagatggaggccatatctcacaacccttcgttc
gccttcaaagtgaaggactttagcgagctcaacacggtgcctggaagactcaacacctat
gtgaacttgcccaaagaggagctgcaagtcgtgctacagcaagttcatactagcgatgct
gttaaaaaagatattgtgttcctactggaaggctctgataacacaagaaatggcttccca
caaatacagcagtttgtcaaaagcatagtggaacgcttgtctattgatgacggcaaggac
agagttgctgtggtccaatatgctgatacacccacggtagagttccacctgtctacatac
aaagataaaagtaatttgatgggtgccattgacaaactaaggcacaaaggtggaacagat
gttaatagcggtgcggccatgcgtttcacacgacttatggttttcacttcctcatggggt
agtaggcgacttgaaggtgtgccccagattttggttgttctgactagtcaaccatctgat
gataatatcaaaactccggcgtttgcactaaaagaacatgagattatggctgtgggtgtc
ggagtgggagatgcagatcggcctgaactggaagtcattgcatttaaacccaatatggtt
tacatggtgaatgactatggcatgctgagtcaaatccagtcacacgttatccccactcta
gacttgaaaaaagacaccaaggaagcattgaatgggatctctgacttagtagttgacaca
ggaggtgataggagagacatagtatttttggttgatggttcggatgactccagaaatggc
ctcccagcaattcgtgaattcatccgacgaatggtagaggatatagaggatgaagtgatc
cgtgtggctgttgtacaatacagcgatgacaccaaagcttgcttcaatttgaactctcac
aaaaccaaaagtgccattgtctatgctgttagaggtctacgacacaagggagggacatca
cgaaatactggtttggcacttaagtttgtccatgatcatgtatttacgcctttatctgga
agtaggaaattggaaggtgttccccaaattctgatattgctcactggaggcaaatccagg
gatgacgtgtcacaaacagcattaaaattaaagcaaatgggagtccttatatttgccatt
gggatgaagaacgcccagcaagaggaacttggtctaattgcttcatttcccaaatcactt
tataattttcctgtgattggagagcttttgtctgttcaaccagaaatagccacatttatt
caagatgaagttcattcattcaccccaaatgttgaattagagtctgctcaaagagacatt
gtatttttgttggatggctctgatgaaactctgggcatgttcccaatgatgcaacatttt
gttcaaagtatggtagagtcactcaatgtcggtgagaataccgaccgtgtgtctgtggta
caatacagtgaccaaccagaaaccgaaatcaatttgaatacctactttgacaaacaggat
gttcttgaggctgtccaaaacatgatccatatgggaggtgaagggagaagcacaggggct
gctctggaatatgtgaaaaaagatgtctttacctcaacaatgggaagtagaaatcaagat
ggtgtcccacaaatactggtattgttgactgggggtaaatccagtgatgatgtgaccaat
gctgctgctgctctaaagcaagagagagtcatgccattttgtgtgggcaccagaaatgct
gatatactggagctgcagaatattgcacatataccatcatataccttcactgtgcctcaa
tttgacactggcagcaccccccaacaactggtgtctttgattaaaaaagtcccacggcag
ccaaggcaaattccagagactgtaataagatcaggttctccagattttctgcttcagtcg
atgcagcgtgattttgtattcttactggacacttcagatgaaacactcactgaatttgac
tcaatgattggctttgttaagaccattatccagagtgtgaatgtgcagaggaacaatgat
cgtgttgcattggttcagtacagcgctgagccttcagtcaatttttacctgaactcttac
caaacttatgaaactgtgacagaggctttgcataatgtacgacacaaaggtggcagagca
cgcaacactggcaaagcaattcagtttgttaaagataatgtattcacttcctcatctggg
agcagacatcaaatggctgttcctcaagttttggtgcttataactggtggaagatccagt
gatgatttcagaaatgcagttgcaagtttgaaagctatgggagtgattgtattcgtgttg
ggaacaaagaaagcagatgtgctggagatgcagtctgtttctcataagccggaatatgca
ttgattgccacagatccaagagagctttcaggtattgagcagctcataaagtccgctaca
caaaaggttgaagcttctgccataagaccaccttcaattgatattacagataacataaaa
agagatgttttgtttcttctggatggttctgatgattctcgtgcaatgtttgaagacata
aaagactttgtgaaatacatattgccagaacttaacattggtccaaatgaagacagggta
gcagtggttcagttcagtaatacaacgcaaactgagtttgactttaacaagtactccaca
tcggatgatattggtaaagcagtgacagccctaaaacacaaaaggggctatcctcattat
attggacaggcactccagcatgtaaaggacaatatgcttacaactggatcaggaagtaga
attgatgaaggtgttccacagatacttatactaatatatggaggaagatcccaagatgac
attcggacaccagccaaaatgctcaaagaaactggtgtgatttcaattgcaatcgggacc
tctgatgcagacaccattgagctgcaaacaatagctcatgagcctaaatatgcactgtct
attgatgactatgaggagattattagcatcagacaacaggtattgtctttgatgaatgcg
cacagtgtccaaccaattgctccaacgaaagtcatagaccacaagaaaagtgatgtagta
tttcttattgatggatcatatgactcaagaaatggctttgaacagttaagaaacttcatt
aaaaccacggttgagaccatgaacatagacgataaccaagatcaagttgctgttgttcag
tatcatcgtgatcctactgccaatttctatttgaattcatactcaagtaaaaatgatgtg
ctgagctctgtcagaacaatgaggcacaaactcggaaggccactgaatcttggcaaagca
ctggagtttgtgagaagtaatgtttttgccgcagaggttggaggaagacgtgatcaaatg
gtgcctcagtacctttatgtgttcagcggtggcaggtctagtgatgatgtgagaggagct
gcccagtcactccgagataatggcattaagactgtaagcattggaacaagcaatgctgat
actctggaaatgcaaacagtggcccatacaccagcacattatatttctgtgtcaaatttt
aacaacttgcaaaaccttaaccaaaggattgaggctgttctgagtggcattccagaatca
actgagtttccacctgtagttgaaatatccagcattcgactgtctgaacttcagattgct
gatattgtgtttcttcttgatggatccaaggacatgctcccaagtgaaaaacccatttgg
aactttatcatgggatttgtggagcaattagaaatcggaccgagcaggatgcaagtagct
ttgattgaatacaacacacagcccacagtacatttctccttaaacagatattcttcaaga
gatgatgtcttacattatttgaaatacacagagctttcaggacgacctaatgttaatctt
ggtgcagcactggactatgtgagaacaaatgttttcactgctgcatcaggaagcagagcc
atgcacggtgtaccacaaatactaataattgtaacgtcaagaaaatcagatgatgacata
gtgggcccattgggcaggctacagaaaacaggaactgtaacatacagtattggaataaat
aatgctgataggatggaggtggaacaattggcacacagtcctgaaaccaaatatttggat
gtgtcagattttactcaagtgagagaacagatattgtcaggcaaaacaacccatggaaaa
cctctttatccatcattaggttctaggtccattatgaaaagagatgttgtctttctcatt
gatggatcagacgatgtcagaaataaattctcttcaatgagagattttgtggctaaagtt
gtcaccacatttgagattgacgatggaaaagatagggtggctgttgttcagtatagcagc
aaagctgagcaaagtttcagcctgaatacttataccacaagggaggaggtcttaaggaac
attgcaaacctaaaaccaaaaggtggacggccacaatatattggggcagcattgcagcat
gtaattgataaggtttttatttcaaatgctggaagtcgaaaaaatgaaggtgccaaacaa
attcttatcattttggctggtggaaggtcaagagattccccaagagggccagcaactgct
cttaaagctgcaggagtagaaatgtatgctcttggatcaaaaacggcaaattcacaagaa
atgcaaatgattgcatccaatccaaactacacatattcagtccctgattttgtaaatctt
cctttagtgcatcaaagtttagtggcctacctctctcaatatgaagaagtggaagatgtt
aaaatagttaatataggtgaaaacactgaccatgtgtctgtggtccagtacagcagagat
gcagaggtcagtttctatctgaacacacatgacaccagagatgatgttttgggtgcagtc
agagggctgagacacagaggaggcagacccctcaacaccggggcagccctccaatacgtc
agggacaatgtcttcacaaactctgctggcagcaggagtctgcaaggtgttccacagatg
ttgatccttctaaatggcggaaggtcttttgatgatgcggaaacaccggccgctgctctc
agagacaagggcatcattgtgtttggcattggagcaggaagggctgccggggcagagatg
aaaaacatagcatatgaccccagttatgctgtgtctgtgtctgatttctctgacctcccc
aatgtccaagagcagctctcttctgtaatgagcacaacagtagtgcaggtcacgacaatt
acaccaaatgtaaccg
DBGET
integrated database retrieval system
