Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110161293
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Entry
110161293 CDS
T05002
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110161293
03041 Spliceosome [BR:
bpec03041
]
110161293
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110161293
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110161293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
110161293
NCBI-ProteinID:
XP_020781684
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MDTGHFQVNAELHPHDLRGSDELLSSVSNGPYIMSTTANGSDSKKFKAEMRGVGSPSRVL
HIRRLPTDVTETDVISLGLPFGDVTNLLMLKAKNQAFLEMRSEDAAESMVAYYSTVLPVV
RNQPVHVQFSNHKELKTDNSPNQERAQAALRALSSSHLDPAAPPPSAVLRVVVENMVCAP
GAVTMDTLYQVFSKFGTVLRIIVFTKNSQFQALLQYSDGQAAQAAKVLLDGQNLYSGCCT
LRISFSKLNTLDIKFNNERSRDFTRPDLPSGDAPAMEHPPPMATAFTAPGLIPAAPYPTA
THAFPHAFTIQPTVSSYPGLVPALPGTLTSLSLPAASRLGFAALPAANAVLLVSNLNPER
VTPHCLFILFGVYGDVMRVKILFNKKENALVQMADATQAQLVMSHLTGQRLHGKPLRITL
SKHSSVQLPREGHEDQGLTKDFSTSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVED
DLKRLFSSSGAIVKAFKFFQKDHKMALIQLGSVEEAIESLIQLHNHDLGENHHLRVSFSK
SSI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggacacgggccatttccaagtcaacgccgagctccatccgcacgatctgagaggatct
gacgagcttctgtccagcgtctccaacggcccgtatatcatgagcaccacagccaatggc
agtgacagcaagaagttcaaagcagagatgcgtggcgtgggctctccctctcgcgtgctg
cacatccgcagactccccacggacgtcacggagacggacgtcatcagcctgggcctgccc
ttcggagacgtcaccaacctgctcatgctcaaggccaagaaccaggcgttcctggagatg
aggtcagaggacgccgccgagagcatggtggcgtattactcgactgtgctgcccgtggtc
aggaatcagccggtgcacgtccagttctccaaccacaaagagctcaagacggacaactct
ccaaaccaggagagggcgcaggcagctctccgtgccctcagctcgtcccacctggacccc
gccgccccgccccccagcgccgtgctgcgtgtggtggtggagaacatggtgtgtgccccg
ggcgccgtcacgatggacacgctctaccaggttttctcaaagttcggcacagttttgcgg
atcatcgttttcaccaaaaacagccagtttcaggcgctgctgcagtactcagacggacag
gccgctcaggctgctaaagtgttgctggacggtcagaacctgtacagcggctgctgcacc
ctgaggatcagcttctccaaactcaacactctcgacatcaagttcaacaacgagcgcagc
cgcgacttcacccgcccggacctgcccagcggagacgcacccgccatggagcacccgccg
cccatggccaccgccttcacagctcccggtctgatccctgctgctccgtatcccactgcc
actcacgccttcccacacgccttcaccatccagcccacagtgtcgtcgtaccccggcctg
gtccctgccctgccaggcactctcacctctctgtccctgcctgctgcctccagactgggc
ttcgcggctctccctgcagccaacgccgtgctgctggtcagcaacctcaacccagagaga
gtcacgccacactgcctctttattctcttcggagtgtacggcgacgtgatgagagtcaaa
atcctcttcaacaaaaaggagaacgccctggtgcagatggccgacgccacgcaggctcag
ctcgtgatgagccacttgacagggcagcgcctgcacgggaagcccctgaggatcactttg
tccaaacactccagtgtccagctcccccgagagggccacgaggaccagggtctgaccaag
gacttcagtacctcccccctgcaccgcttcaagaaacctggctccaagaactactccaac
atcttccccccgtctgccacactgcacctgtcaaatatacccccgtctgtggtggaggac
gacctgaagaggctgttctccagctccggagccatcgtcaaagccttcaagttcttccag
aaggaccacaagatggctctgatccagctgggctctgtggaggaggccatcgagtccctg
attcagctccacaaccacgacctcggagaaaaccaccacctcagagtgtccttcagcaag
tcctccatctga
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