Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110161957
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Entry
110161957 CDS
T05002
Symbol
dhx40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
5.6.2.6
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110161957 (dhx40)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110161957 (dhx40)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
110161957 (dhx40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110161957
NCBI-ProteinID:
XP_020782457
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSKSSRSEPKESDSKPLPIYHHKSKLIRAVKDSTFLVVTGETGCGKTTQLPQYLHEAGFC
KNGKIGITQPRRVAAITVAQRVAQEMGYTLGKEVGYQVRFDDCTTEDTEVKYMTDGCLLR
EVLADPGLSQYSVVILDEVHERSLNTDILLGLLKKVFSNPDKANMGRRLPLKMVVMSATM
ETEKLSAFLGNCPVFVIPGRTFPVKCSFGLAVGPKDTESTGYVKEVVKVALDVHTSEIAG
DILVFLTGQNEIERACDMLYEKAESIDYRYDVHDRTVEGLLIFPLYGSMPTDQQRQIFQP
PPRGIRKCVVATNIAATSLTINGIKYIIDSGFVKQLNHNSRVGLDILEVVPISKSEAQQR
AGRAGRTSAGKCFRIYTKEFWEKCMPEYTIPEIQRTSLTAVVLTLKCLGVHDVIRFPYLD
SPEERFILEALKQLYQFDAIDRRGRVTKLGELMVEFPLHPGLTRAVLKAASYGCPDLMLP
VAAMLSVENIFIRPGHPEKQKEADQRHRELASKSGGMNDFATLLSIFQMCKSSEKPSAWC
KENWIHWRALKSAFSVETQLREIFLRLQQRTDFPVESFDGNKNELFRRCLCAGYFTNVAR
RSVGKAFCTMDGHGSMVHIHPSSALFENEKDLDWVMFYDVLVTSKVYIRTVCPIRYEWVK
DLLPKLHEVDVYELSNVAREEVTEEEMAKWENKEAAKRQQEAAAEEAMKKLEKRNDDASV
SDARARYLQRKQQKQSKAK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcaagtagatcggaacccaaagaaagcgactcgaaaccgctgcctatttat
catcataagtctaaactgattcgagctgtaaaggatagtacatttttagttgtaacagga
gagactggctgcgggaaaaccacacaacttcctcaatatctccacgaagcaggattttgt
aaaaatggaaaaattgggatcactcagcctcgccgtgttgcagccatcacagtggctcag
agagtggctcaagagatggggtacacattgggaaaagaagttggctatcaggtccgcttt
gatgattgcacaactgaggacacagaggtcaaatacatgactgatggctgtctgctccgt
gaggtcctggctgatcctggactttctcagtacagtgttgtgatcctggatgaggttcat
gagcgcagccttaacacagatattttgctgggcttattaaagaaggttttttccaaccct
gataaggccaatatgggtcgtcgcctgccgctaaagatggtggtgatgtctgccacaatg
gaaactgaaaaactctctgcctttcttggcaactgtcctgtttttgttattccaggaagg
acatttcctgtcaaatgttcttttggcctagctgttgggcctaaagacacagagagcacc
ggttatgttaaagaggttgtaaaggtagctctcgatgtgcataccagtgaaatagctgga
gatattctagtatttttaacaggtcaaaatgaaattgagcgagcttgtgacatgctctat
gagaaagcagagagtatagattatcgctatgacgtacacgaccggacagtagagggcctt
cttatttttcctctgtacggctccatgcctacagatcagcaaagacagatttttcagcct
ccgcctcgaggaatcaggaaatgtgttgtagccacaaatatagcagccacttctctgacc
attaatggtatcaagtatatcattgacagtggatttgtgaaacaacttaatcacaactca
agagtcggcttggacatcttggaggtggtgcctatttcaaaaagtgaagcgcagcagaga
gccggccgtgctggaaggacctcagctggaaaatgctttcgaatctacaccaaagaattc
tgggaaaagtgtatgcctgagtacaccattccagagatacagaggaccagtctcactgca
gtggtgctcaccttaaaatgtcttggagtccatgatgttatcagattcccttatttggat
agcccagaggaacgatttatccttgaggcactgaaacaactgtatcagtttgatgcgatt
gacagaagagggcgggtaactaaacttggagaattgatggtggagtttccgctacatcca
ggtctgacccgggcggtgcttaaagctgcctcttatggatgcccagacctgatgctgcca
gtggctgccatgctttcggtagagaacatcttcattcgaccaggtcaccctgaaaagcag
aaagaagcagaccagagacaccgagagctggcttcaaaaagtggaggcatgaatgatttt
gctacacttttgagtattttccaaatgtgtaaatccagtgaaaagccatctgcctggtgc
aaagaaaattggatccactggagggcgctgaagtcagcctttagtgttgagacacagctg
agagagatcttcctcagactacagcagaggactgattttccagttgaatcatttgatggt
aataaaaatgagctcttcagacgatgtctatgtgcaggatatttcacaaatgttgccaga
aggtctgttggaaaagcattctgcacaatggacggccatggctccatggttcacattcac
ccatcctcagctttgtttgaaaatgagaaggatttggactgggtgatgttttatgacgtg
ttggtgacctctaaagtctacatcaggacagtgtgcccaatccgatacgagtgggtcaag
gatttactgccaaagcttcacgaggtggatgtttatgaactcagtaatgtggcacgagaa
gaagtcactgaggaagaaatggccaaatgggaaaataaggaagcagcaaaaagacaacaa
gaggcagcagctgaggaagctatgaaaaagctggagaaaagaaatgacgacgctagtgtc
agtgatgctcgtgctcgatacctgcagcggaagcaacaaaaacagagcaaagcaaaataa
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