Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162087
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Entry
110162087 CDS
T05002
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110162087 (vps13a)
Membrane trafficking [BR:
bpec04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110162087 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
110162087
NCBI-ProteinID:
XP_020782617
LinkDB
All DBs
Position
Unknown
AA seq
3217 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLQLGIWGGDAILKNLEIKENALSQLDIPFKVKAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQFLEARQRELQRIEE
TKLKAAEQENPGLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLE
NLSLQTADQNWRPTLLDEKAKLFFKLVKLDNLFAYWNVNSVLFSSHQSEEALKCLKSSMK
SNNNYPVTHEFIFRPISADAKLKMNPRSDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPNVPVHRNSKIWWKYMITSVLEVDVKPRLHMWSWTRIRQHRQ
AVKKYKEEYKTKITSKKPSEELLRRLQEPEKTLDIFNITLARQQAEVEASKAGLKIYRPG
LKMEEEESQGWFGWMWNWGGQGETEVKETKGGGGFDELLTPAEKAKLYTAIGYSETAANP
NLPKDFEDMKVNFHMEKLSVSIKHAKDRNEIIRLTVGELQSMLTQRPGAQALKVTAQLTL
FEVTGLANQNPAPTLLSSRKAATGAGTPLLCILFETNPLDESANQRLHVTSQPLEIIYDS
TTVNGMAAFFRPPDDLELDELTNATLMKLEQFRDRTATGLMYVIETQKTLDLKVNLMASY
VIIPQTGYYDNTQNILLLDLGHFKMSSQSRKHLPQLSVTCSNIEDIMSRAYDSFDIQLSS
LQFLYSKPDGDWKMARKQRESPLHILEPVDLKVVFSRAMVVKDSRMAKYKLSGELPRLSL
RISDNKLRSVLELVDSIPLPESRPPARSNPHQGSIKPRSFTPQLTHRRPLSLGDQRSSFI
FGSEEELFYDAPTSPLDDKPFFPDDPRPLRTISKRTSLQDDAKKNMTDLVLNFEIDKFSV
ELCRLSEAVEITVLLLEIEGLGTELKLRTFDMTSNTYLKEICLKCPEYMDSEAKEVQLIT
TRDNCEEDLLTLEYIKADKNGPEFKSLHSNTEQLTKVTFSSLDVHLHTEALLNTMNFLDN
LLPKKTSSPKEVGPEELPTIPEEDEGDGEKEEEKKEETALFADIVNMHIRADLRCLKIFI
RGQKARISEISIEGLVSEVLMRKKEMEILAHLKNIIILDCDKDALYKKAVSIADKEVFDF
RMVNYTCATQGDAYLDMSKVDTSVTLNVGCIQVVFLNKFLSSILAFINNFQEAKAALAEV
TVQAAEKAASGVKELAERSSRISLSVHFNAPVIFLPQSSSSSNVIVADLGRLSVKNRFVT
KPFKSDAKIPPVVDIIKVKLTDLKMYRTTYKNDKFQGETQLLMPVSLDLEVLRNLSSNWY
HNIPDIEIIAHLKPMNLILSQDDLTVVLRTLSENLSENSELGGPSAPPPSSDPGDPGDSS
DPSSDASTRGSGTSPPSRNNTVVTSAVVESQKNTKPKTSLKLDFKFDSMTLVLFTPNGNE
AQLLDSHDEQLKLAEFTLGTISTSFHMFSDSSMRALVQLAACFLDDKRPKIKMVTSRMMA
LRPGAEQNMMVEVKYRQGREGTVLDTLVQDIANIFLTASQQGFGQTPQNKSNAGAEKKNP
SSVASRESTSTPPPASKEIHVVVRNPEIVFVADLSRGDAPALVMTTQCELMIRSQTTAGI
NDLKVVACPFLREKRKNNVTTVLQPCKVFLLSSETPHTPQVNEITINSLTLKVSPIIINT
VITIQSALSPTPETPEEQDSPVPVDLWERRSWRDLKLWFLEEESDEDQQQQAPLIPSGES
LQMSIKSICLTLEAGVGHRTVPMLLAKSSFHGDVTNWSTLINLHSALSLEVHYYNEMLGV
WEPLVEPLEDEKKEGFKPWTLELRMKKKPVKYSGMSDEVDYIVPDYKTVIVVSSKDQLNI
TVSKCGLAMLSNLGTAFAEAAKQTAECFQKDEAPFVVKNRLGLPVSVRYSEMFNPIGLEA
PTRTVELQDGGTLGMDYFVTTDSDQFSAMISLSGKDYYIQPTPVGHTPTSVIPLIKVGRG
MYSVVHRDSGVTRFLVCQIYSVEGSKYVKIRSPFQIINHFSIPFKVFEGTTFLGTALPTE
EFCVPLDSYRSELCLQPVTGEEEEEEAEFCCSEGFSYEDLSNQAPEQRIQQTCKHRFTQS
QVLTVNMVPQKDTVSFTHTGGAGENFDVPFVLHLWPSILLRNLLPYPITYRLKDSGEASP
AATLEPGHSAQLHTAVIDQSSLDLCLIDYLAQDWASEYSLCSDQEEITFVVFKSLREEED
VSDGTEMKRAELDIAVHVSCDQGQTVVAIHSPYWMINKTGRLLQYKADDIHRKHPMDYDM
PLLFSFKPRYFFRNNKVRLMISDSELSDDFSLDTVGSHGEVKCKGRYKDYLVGVKIDATS
FSLTRIVTFVPFYTLVNRTKHSVFICEEGLDNWTEAQPGQSAVPFWPENDTKKLKIKVEG
LSPPQIIDFTRPENCLLLHLDNSVGGIIVDVNLSEHSATIRFSDYHDGAAPFLIINHTKN
QTLLFHQSSQGEAEQEELEPGKAVYYTWTEPTGSRELCWKCGNYSGKLECVKDHNEDMNK
DGKLYVVSFYEGLQRVVLFTEEKSIFQLLSESEKAQLAEQEIILSLQSVGMSLVNNSTGQ
EVSFIGITSSDVVWEHKPKKKKDRWKTLSIKEADILESSYQTYLSTEPVDNGIVDLENNF
QVCFTPNGTDMRMLQPTDAPLRRHFLPGVKVEYSVSPRQKSYRIQIHRIQIQNQLPGAIF
PYVFYPVKLPKSIVMEAEPKPLTDISIVTRTAGHSDISRIKYFVVLIQEMDLKVDLGFLY
AILDLFTPENASAVTTEQEVELFEKDIEYIKAELNNGSAADNSPISLFEFFHISPIKMHL
SFSLSTGGEDGLKEKRDKELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELKFMFCTTQ
QLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPWQGAIQGPEEF
VEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNKQPSGLRE
GLARGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMAS
STFQGIKRAAETSQDIESLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRFAKYRYFA
HAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEDRRLRIEAKERVK
SVFHAKEFGKIINFKTPEIAKWVLAKLEDARESLPKY
NT seq
9654 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagagcgtggtggtcgacgtcctcaacaggttcctgggggattacgtggtg
aacctcgactcgtcacagctgcagctcggcatctggggaggtgatgccattcttaaaaat
cttgaaatcaaggaaaatgctctgagtcagcttgacattccctttaaagtaaaagctggg
cacataggacgtttggagcttaaaattccctggaagaatctttacacacagtcggtggaa
gctacactcgatggggtctacctcctcatagtccccacagcaagtataaaatatgacgcg
gagaaggaggaaaagcagttcttggaggctcgacagagggagctgcagaggatagaggag
accaaactcaaggcagctgagcaagaaaaccctggtctggagaagcaggacacgtttgtg
gagaagctggtgactcaggtcatcaagaaccttcaggtgaagatctccaacatccacgtc
cgatatgaagacgatgtcacaaacccaaactgccctctgtcatttggagtttcactggaa
aacctcagtctccaaactgcggatcaaaactggagacctactctcctggacgagaaggcc
aagctgttcttcaagttggttaaactcgataacctgtttgcctactggaacgtcaactct
gtgcttttctccagtcaccagtcagaggaggccttgaaatgtctaaagagcagcatgaaa
agtaacaacaattatccagtcacccatgagttcattttccgtccgatctcagccgacgcc
aaactgaagatgaacccccggtctgacgtggacttctcgtctcctaaagtcgacctcatg
gtgaatctgagcgaagtggccattgaactgaacaggccgcagtacatcagcatcctggag
ctgctcggctcagtggatatgatgtccagaaatctgccgtacaggaagtacaggccgaac
gtcccagtccatcgaaacagcaaaatctggtggaagtacatgataacgagtgttctggag
gtggacgtgaagccccgcctccacatgtggtcctggactcggattcgtcagcaccgtcag
gcggtgaaaaagtacaaagaggagtacaaaaccaagatcacgtccaagaaacccagcgag
gagcttctgcgcagactacaggagccggagaagacgctggatatttttaacatcacatta
gcccgacagcaggccgaggtggaggcgagtaaagcaggcctgaagatctaccgcccgggg
ctgaagatggaggaggaggagtctcagggctggttcggttggatgtggaactggggcgga
cagggcgagaccgaagtcaaagagaccaagggcggaggaggttttgacgagctgctgacc
cccgctgaaaaggccaaactctacacggcgatcggttacagcgagacggcggccaacccg
aacctgcccaaagacttcgaggacatgaaggtgaacttccacatggagaaactgtccgtg
tccatcaaacacgccaaagacaggaacgagatcatccgtctgacagtgggagagctgcag
tccatgctcacacagagaccgggcgcacaggctctcaaagtgactgctcagctgactctg
ttcgaggtcacgggcctggccaatcagaacccggctcccacgctgctgtcgtcgaggaag
gcggcgacgggggcggggactcctctgctctgcatcctgtttgagaccaaccccctggac
gagagcgccaaccagaggctccacgtcacgtcacagcctctcgagatcatctacgactct
accacagtgaacgggatggctgcgttcttcagacctccagacgacctggagctggacgaa
ctcaccaacgccactctgatgaagctggagcagttcagggaccgcacagccaccggtctg
atgtacgtgatcgagactcagaaaaccctggacctgaaggtgaacctcatggcctcttac
gtcatcatccctcagaccggttactatgacaacacccagaacatcctgctgctcgacctg
ggacacttcaagatgtcgagccagagcagaaagcacctgccgcagctgtccgtcacctgc
agtaacatcgaagacatcatgtccagagcctatgacagcttcgacatccagctcagcagc
ctgcagttcctctacagcaaaccagatggagattggaaaatggcgcgtaaacagagagag
tctcctctgcacatcctggagccggtggatctgaaggtggtgtttagtcgtgccatggtc
gtcaaagactcccgcatggccaagtataagctgtctggagagctcccgcgtctgtctctg
cgtatttctgataacaaactgcgcagtgtcctggagctggtggacagtattcctctgcct
gagagccggccccccgctcgctccaaccctcaccagggctccatcaagcccaggagcttc
actcctcagctcacacacagacgccccctgagcctgggagaccagcgctcctctttcatc
ttcggctcagaggaggaactgttctacgacgctcccacttctcctctggacgataaaccc
tttttccctgatgatcccagacctctgcgcaccatcagcaagagaacaagcctgcaggac
gacgccaagaagaacatgaccgacctcgtactcaacttcgaaatagacaagttctcggtg
gagctctgtcgcctctcggaggccgtggagatcactgttctgctgctggagatcgagggt
ctgggcacagaactgaagctcagaacctttgacatgacgtccaacacctacctgaaggag
atctgcctcaagtgccccgagtacatggattctgaggccaaagaggttcagctcatcacc
acacgagacaactgtgaagaggacctgctcacgctggagtacatcaaggcagataaaaac
ggccctgagttcaagtctctgcacagcaacacggagcagctgaccaaggtgaccttctcc
tctctggacgtccacctccacacagaggctcttctgaacaccatgaacttcctggacaat
cttctgccaaaaaagacgtccagcccgaaggaggtgggcccagaggagctgcccaccatc
ccagaggaagatgaaggcgacggcgagaaggaggaagagaagaaggaggagaccgcgctc
tttgcagacatagtgaacatgcacatcagagctgatctccgctgcctcaaaatcttcatc
cgaggacagaaagccagaatctcagaaatcagcatcgaaggtctggtctctgaggttctc
atgaggaaaaaagagatggagattctggctcatttgaagaacatcatcattcttgactgt
gacaaagacgccctgtacaaaaaggctgtgtccattgctgataaggaggtgtttgacttc
cgcatggtgaactacacctgtgccactcaaggagacgcgtacctggacatgtctaaagtg
gacacatctgtcactctgaatgtgggctgcatccaggttgtcttcctcaacaagttcctc
tcctccatactggcgttcattaataacttccaggaggcgaaggcggccctggcagaggtg
acggttcaggctgcagaaaaggcagcgtctggggtgaaggagctggccgagaggagctcc
cggatctctctaagtgtgcactttaacgctcccgtcatcttcctccctcagtcctcctct
tcctcaaacgtcatcgtagcagatctgggccgactctccgtcaagaaccgcttcgtcaca
aagccattcaagtccgacgccaagatccccccggtggtcgatatcataaaagtcaaactg
accgacctcaagatgtacagaaccacgtacaaaaacgataagttccagggggagactcag
ctcttgatgcccgtgagtctggacctggaggttctgagaaacctgtcgtcaaactggtac
cacaacatccccgacatcgagatcatcgcacacctcaaacccatgaacctgatcttgagc
caggacgacctcactgtggtgctcaggactttgagtgaaaacctgtctgagaattccgag
ctcggtggcccctcggcgcctccaccctcctctgaccccggtgaccccggtgactcttcc
gacccctcctctgacgcctccacccgcggctcaggcacctctccacccagccgaaataac
acagtggtgacttctgctgtggtcgagtctcagaaaaacaccaaacccaagacgtctctg
aagttagactttaagtttgactccatgaccctggtcctgttcactccaaatggaaatgag
gcgcagttgttggactctcacgatgagcagctcaaactggctgagttcactctgggcacc
atctccacctcgttccacatgttctcagacagctccatgagggccctggtgcagctggcg
gcctgtttcctcgacgacaagagacccaaaatcaagatggtcacgtccagaatgatggcg
ctgcgtccgggagcagagcagaacatgatggtggaggtgaagtatcgtcagggcagagag
ggcacagtcctggacacgttggtgcaggacattgccaacatcttcctgacggcctcacag
cagggcttcggtcagactcctcagaacaagagcaacgccggagcagagaagaagaacccc
tcctctgtggcgtccagagagtccacctcgactcctccccctgcgtctaaggagattcac
gttgtggtgagaaatcctgagatcgtgttcgtggccgacctgagccgcggcgatgccccc
gccctcgtcatgacgacgcagtgcgagctcatgattcggtcacagacaactgccgggatc
aacgacctcaaggtggtggcgtgcccgttcctcagagaaaagaggaaaaacaatgtgact
acggtcctgcagccctgtaaggtgttcctcctgtcctccgagacgcctcacacgcctcag
gtcaatgagatcaccatcaactccctcacgctcaaggtctctcccatcatcataaacaca
gtaatcaccatccagtctgccctgagcccgaccccagagacccccgaggagcaggacagc
cccgtgcccgtcgacctgtgggagcgccgcagctggagggacctcaaactctggttcctg
gaagaagaaagcgacgaggaccaacaacagcaggctccactcatcccgtctggagagtct
ctacagatgagcattaagtcgatctgtctgaccctggaggccggtgtgggacacaggacg
gtgcccatgctcctcgccaagtcctctttccacggagacgtcaccaactggtccaccctc
atcaacctgcacagcgccctcagtctggaggttcactattataatgagatgttgggcgtg
tgggagcctctggtggagcctttggaagatgagaagaaagaagggtttaagccctggaca
ctggagctcaggatgaagaagaagccggtgaagtactcggggatgtctgatgaggtggat
tacatcgtccctgattataaaaccgtcatcgtggtcagcagcaaagaccagctcaacatc
acagtgtccaagtgtgggctcgccatgctgagcaacctgggcacggcgtttgcagaggca
gctaagcagacggccgagtgctttcagaaggatgaggctccgtttgtggtaaagaatcgt
ctggggctccctgtgtctgtgcgctacagcgagatgttcaaccccatcggcctggaggcc
cccacccgcactgtggagctgcaggacggaggaactctgggcatggactactttgtgacc
accgactcagaccagttctctgctatgatctctctgagcggcaaggactactacatacag
cccactcccgtgggccacacccccaccagtgtgatccctctgattaaagtgggccggggc
atgtacagtgtggtccacagagactcaggagtcacgcgcttcctcgtctgtcagatctac
tctgtggaaggaagcaagtacgtcaagatccgctcccctttccagatcataaatcacttc
tcaatcccgtttaaagtttttgaaggaacaacgtttctcgggacagcgctccccacagag
gagttctgtgtgcccctggactcatatcggtcagagttgtgtctgcagccggtgacaggg
gaagaggaggaggaggaggcagagttctgctgctcagagggcttcagttatgaggacctg
agtaaccaggctccagagcagaggatccagcagacgtgtaaacaccgcttcacccagagc
caggtgctaacggtcaacatggtccctcagaaggacacggtctcctttactcacactgga
ggagctggggagaacttcgacgtgccctttgtgctccacctgtggccctccatcctcctg
aggaacctgctgccctaccccatcacatacagactcaaggacagtggagaggcgtcccct
gctgccaccctggagccaggacactctgctcagctccacacggccgtcatcgaccagtcc
agtctggacctgtgcctcatcgactacctggcccaggactgggcctcggagtacagcctc
tgcagtgaccaggaggaaatcacatttgtggtgtttaagtctctgcgtgaggaggaggac
gtgagtgacggaacagagatgaagagggcggagctcgacatcgcggtgcacgtgagttgc
gaccagggccagaccgtggtggctattcactccccctactggatgatcaacaaaacagga
cgtctgctgcagtacaaggccgatgacatccaccgcaaacaccccatggactacgacatg
cccctcctcttctccttcaaacccagatacttcttcaggaacaacaaggttcgtctgatg
atctcggacagtgaactctctgatgatttttccctggacacagtcggtagccacggagaa
gtcaagtgtaaaggacgctacaaagactatctggtgggagtgaagatcgatgccaccagt
ttcagcctgacccggatcgtgacctttgtgcccttttacactctggtgaacagaaccaag
cacagtgtgtttatctgtgaggagggactggacaactggaccgaagctcagcccggacag
tctgcagttcctttctggcccgaaaacgacacgaagaagctgaagatcaaagtggagggt
ctgtctcctcctcagatcatcgacttcacacgaccagagaactgcctcctgctgcacctc
gacaactccgtgggcgggatcatcgtggacgtgaacctgtcagaacactcggccactatc
cgcttctccgactaccacgacggggccgcgccgttcctcatcattaaccacaccaagaat
cagactctgcttttccatcagagttctcagggggaggcggagcaggaggagctggagcca
gggaaagccgtgtactacacctggacggagcccaccgggtccagggaactgtgctggaag
tgtggcaactacagcggcaaactggagtgcgtcaaggaccataacgaggacatgaacaaa
gacgggaagctctatgtggtctcgttttatgaaggcctgcagagggtggtgctgttcaca
gaggagaagtccatcttccagctgctgtcggagagtgagaaggcccagctggccgaacag
gagataattctgtctctacagagtgtgggcatgtccctcgtcaacaactccacaggacaa
gaggtttccttcatcggaatcacaagctctgacgtggtctgggagcacaagcccaaaaag
aagaaggatcgttggaaaactctgagcatcaaagaagcagacatcctggagagcagttat
cagacttacctctccacagagccggtggacaacggcatcgtcgacctggagaacaacttc
caggtttgcttcactcctaacggcacagacatgaggatgctgcagcccacggacgccccc
ttgaggaggcacttcctccctggagtgaaggtcgagtacagcgtgtcaccgcgacagaag
tcttaccgcatccagatccaccgcatacagatccagaaccagctgccaggagccatcttc
ccttatgtgttctaccccgtcaaactgcccaagtccatcgtcatggaggcagaaccgaag
cctttgactgacatcagcatcgtgaccagaacagccggacactccgatatctccagaatc
aagtatttcgtggtgttgattcaggagatggatctaaaggtggacttgggtttcttgtac
gcgatcttagacctgttcactccagagaacgccagcgccgtcaccacggagcaggaggtg
gagctgtttgagaaggacatagagtacatcaaggccgagctgaacaacggctctgctgcg
gataactctcccatcagtctgttcgagttcttccacatctctcccatcaagatgcacctg
agcttctccctgagcacgggaggagaggacggtctgaaggagaagagggacaaagagctg
atccctgtgcagagtctgaacctgctgctcaagagtatcggagccacactcaccgatgtg
caggacgtggtcttcaaactggcctttttcgagctgaagttcatgttctgcaccacacag
cagctgcagtgggaggtcatccggcactactctaaacaggcgataaagcagatgtacgtg
ctggtgctggggctggacgtcctggggaatccttttggtttgatccggggtttgtctgag
ggagtggaggcctttttctatgagccctggcagggggcgattcaggggccggaggagttt
gtggagggcatggctctgggggtcaaggctctggtgggaggagctgtcgggggcatcgcc
ggcgccgcgtccaggatcacgggggccatggccaaaggcgtggcggccatcaccatggac
gaggagtaccagcagaagagacgagaagccatgaacaagcagcccagcggtctgagggag
gggctggcccgaggaggcaaagggctcgtctctggttttgtgagtggaatcacaggaatc
gtcactaaacccatcaaaggcgctcagaaggagggggcggccggcttctttaagggcgtg
gggaaagggctggtgggagctgtggcccgacccaccggaggcatcatcgacatggcctcc
agcaccttccagggcatcaagagagccgcggagacgtctcaggacatcgagtctctgcgt
cccccgcgcttcatccacgaggacggagtcatacgcccatataaggagagggaggggctg
ggcagtcagatgctccagaaaattgagaacgggcgctttgccaagtacaggtatttcgcc
cacgccaaggtcaatgactcagacttcctcatgatcacaaagaggggtatcttcttcgtg
actaagggcacgttcggacagctgacgtgcgagtggcagtatctgtttgaagagttcacc
aaagacccgatgatcgtggaggatcgcagactgcgcatcgaagccaaggagagagtgaag
tctgtgtttcacgccaaggagtttgggaagatcatcaacttcaagactccagagatcgcc
aagtgggttcttgccaaactggaggacgccagagaaagtttacctaaatactga
DBGET
integrated database retrieval system
