Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162109
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Entry
110162109 CDS
T05002
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110162109 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bpec04990
]
110162109 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
bpec04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
110162109 (pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
110162109
NCBI-ProteinID:
XP_020782631
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MPLQVVLQGGGPWGFRLVGGKDFEQPLTISRVTPGSKAAEANLCIGDHIIAIDGESTEGM
THIEAQNKIKGCADEMALSIDRSEYKMWSPLSSEGGKVNPYKMNLISEPQEVKHIGSAHN
RSALPFSGFGAKVVTNQYNNPAGLYSSENIKDFNSAVDEVKTMASEPNNKSSTDTAKPGA
KKHPVTEGSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTNKIG
ASVGKADKLPMCDKCGSGIVGMVVKLRDKFRHPECYTCTDCNTNLKQKGHFFVEDQIYCE
KHARERVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccaggtggtgttgcagggtggcgggccgtggggcttcaggctggtcggggga
aaggacttcgagcagccgctgactatttcacgggtgactccagggagcaaagcggcagaa
gcgaacctctgtatcggggaccacatcatcgccatagacggagaatccactgaaggcatg
acgcacatcgaagcccaaaacaaaatcaagggctgcgcagacgagatggcgctctctatc
gacaggtcagagtacaaaatgtggtcgccgctctcctcggagggagggaaggtgaatccg
tacaagatgaatctcatctcagagcctcaggaggtgaagcacataggctccgcccacaac
agaagcgctctgccattcagtggatttggggccaaagtcgtgacaaaccagtacaataat
ccagccggcctctactcctctgaaaacatcaaggacttcaactctgctgtggatgaagtc
aaaaccatggcaagcgaaccaaacaacaaatcttccacagacacagccaaacctggagcc
aagaagcatcctgtcaccgaagggtccgaagtttacaaaatgctgcaggaaaaccaggag
tctgacgaacctccgcgacagtccgcctccttcaaagtgcttcaggaaatactagagaca
ggtgactctgacaagccctcgggattcaggagtgtcaaagcccccacaaataagattgga
gcttcagtgggaaaagcagacaaactgcccatgtgcgacaaatgtggatctggcatagtg
ggaatggtggtcaaactacgggacaagtttcgtcaccctgagtgttacacctgcacagac
tgcaacacaaacctcaaacaaaagggacatttctttgtggaggatcagatctactgtgag
aagcacgcacgggagcgagtcacacccccagaaggctacgacgtggtcacagtcttccca
aaataa
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