Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162120
Help
Entry
110162120 CDS
T05002
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110162120 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110162120 (herc4)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110162120 (herc4)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
HECT type E3
110162120 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
110162120
NCBI-ProteinID:
XP_020782642
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MSQDGWPCKGGATMLCWGNASFGQLGLGGIDEEIVVEPRKCDFFHGKRVCGVGCGTRHTT
FLLDDGTVYTCGCNDLGQLGHDKARKKPEQVVALDAQIIEALSCGDAHTLALNDKGQVFS
WGLGSDGQLGLSNFDECVRVPRNIKSLSDVQIAQVACGYWHSHALSKGGNIFSWGQNRYG
QLGLGINGQSICTPQMVQSLQGIPFAQITAGGAHSFARTFSGAVFGWGCNKFGQLGLSDT
NDRYFPALLKSLRSQRVVYICCGEDHTAVLTKEGGVFTFGAGGYGQLGHNSTNHEINPRK
VFELMGNVVTQIACGRQHTLAYTPSSGKMYSFGLGGNGQLGVKTTSNRKSPASVKGPWTP
NDHLDDDSESRDCYLVKMIFAGGDQSFAHYRTSNSSPVTDNEKLPNGQRKICTLDGDLIQ
KWHSYSSGRLPLDITNEIDLVFSSASCLNGSFLSTSNPDHYNTSGKCSGVDMVTARLLFD
RLIQQDRPDISQLIAASLEKNLIPRLPSSPPDIEALRLYLTLPECPLFRERNNFVTITIP
FAKSVLSLKEPPLKVLGNWWSRLEPPVFQHLVELYKEVVVYLLQMHKVGIPQVEQRIFSC
FLDTSLRLLEILHMVNEKTGQIIQYDKFYIHELDNLIDIRNDYVMWIQKQMYPMGHDGLV
TLCRYPFVFDAQAKTTLLQTDAVLQMQMAVDQAQMQNFSSMFIPAVESVNPCLILIVRRE
NIVGDTMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYF
EDSRLIWFSHKTFEDIDLFNLIGVICGLAIYNLTIVELNFPVALYKKLLKKKPTLEDLKE
LMPDVGRSLQHLLDYTEDDLEETFCLNFTITEEHFGATEVLELVPNGEDINVTKSNRQEF
VDAYVDYVFNRAVAPLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWTELEKTT
EYKGEYWAEHPTIRLFWEAFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGE
HYLPVAHTCFNLLDLPKYTDLDTLRSKLLQAIDQNQGFNLA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacggttggccgtgtaaagggggagcgaccatgctgtgttggggtaatgct
tcatttggacagttgggtctgggtggtatcgacgaggagattgtagtggagcctcgtaaa
tgtgacttcttccatggtaaacgggtgtgtggggtgggctgtggcaccaggcacacaacc
ttcctcctcgacgatgggacagtctacacctgcggctgtaatgacctgggacagctgggc
cacgacaaggccaggaagaaaccagagcaggtggttgccctggacgcacagataatcgag
gcgctgtcttgtggagatgctcacacattggcgctgaacgataaaggccaggtcttctcc
tggggcctgggctctgacggacaacttggactcagtaactttgatgaatgtgttcgtgtg
cctcgaaacatcaagagtttgtcagatgtacaaattgctcaggtagcttgtggatactgg
cattcccatgcactttcaaaagggggtaacatattttcctggggtcaaaatcgttatggt
cagctgggtctggggataaatggacagagcatttgtactcctcagatggttcagtctctt
cagggcatcccctttgctcagataacagcagggggcgctcacagcttcgcacgcactttc
tcaggagcagtgttcggatggggatgcaacaagtttggtcaactcggcctcagcgacact
aatgatcggtacttccccgctctgctgaaatctctgcgatcacagagagtggtttatatt
tgctgtggagaggatcatacggcggttctcacaaaggagggaggtgtgtttacgtttgga
gcgggaggatacgggcagctgggacacaactcaacaaaccatgagataaaccccaggaag
gtctttgagctcatgggaaatgtagtcacccagatcgcatgtggcaggcagcacacgttg
gcgtatactccatcttcaggtaagatgtactcgtttggcctcgggggaaatggacagctc
ggcgtcaaaaccacctccaacagaaagagccctgcctctgtcaaaggcccctggaccccc
aacgaccacctggatgatgactcagagtcaagggattgctaccttgtcaaaatgatcttc
gctggaggagatcagagttttgcccactatcgaacttcaaatagttctccggttacagac
aatgaaaaattaccgaacggccaaagaaagatttgcaccttagatggggacttgattcag
aaatggcattcgtactcatcaggaagactaccactggacatcaccaatgagatcgacctt
gtgttttcgtcagcaagttgtctcaatggatcatttctctccacgagtaacccggatcac
tacaacacaagtggtaaatgttcaggcgtcgacatggtcactgcacgactcctctttgat
cgactcattcaacaagatcgccccgacatctcacaactgattgctgccagtctggagaag
aacctgatccccagattaccgagctctcctccagacatcgaagccctcagactctacctc
acgctgcctgaatgtccgctcttcagagagaggaacaactttgtgaccatcaccatcccc
ttcgccaaatctgttctcagcctgaaagagccgcctctcaaagtcctaggaaactggtgg
agccggttggagccccctgtcttccagcatctggtagagctgtacaaggaggtggtggtt
tacctgctgcagatgcacaaagtgggaatccctcaggtggagcagaggatcttctcgtgt
ttcttagacacatcactgcgacttctggagatactgcacatggtgaatgagaagaccggg
cagattatccagtatgataaattctacattcatgaactggacaacctcatagacataagg
aatgattacgtcatgtggattcagaagcagatgtatcccatgggacatgatggtctggtg
actttgtgcaggtatccatttgtatttgacgcccaagcaaagaccactctgcttcagact
gatgcagttttacagatgcagatggctgtggaccaggcgcagatgcagaactttagctcc
atgtttattcctgcggtggagtcagtgaacccctgcctcatcctcatcgtccgcagggaa
aacattgtcggagacactatggaggtcctgaggaaatctaaaaatgtggactacaaaaag
cccctcaaggtgatcttcgtgggtgaggaggcggtcgacgctggaggagtgaggaaagag
ttcttcttgttgattatgaaggaacttttggaccctaaatacggcatgttcagatacttc
gaggactcgcggctcatatggttttcacacaagacctttgaggacatagatttgtttaac
ctgatcggggtcatctgcggtttggccatttataacctgacaatagttgagttgaacttc
cctgtggcactttacaagaaactactgaagaagaaaccaacgctggaggaccttaaagag
ttaatgcctgacgtgggaaggagtctacagcacctcctggactacacagaggatgatctg
gaggagaccttctgcttaaacttcacaatcacagaggaacactttggtgcgactgaagtc
ttggagttggtgccgaacggagaagacatcaacgtcaccaaatcaaacaggcaggagttt
gtggacgcatatgtagactacgtgttcaacagagcagtggcgcctctgtttgagtgtttt
tacgctggatttcacaaagtctgtggaggaaaagtcctggaactttttcaacccaacgaa
ctgcaggcaatggtcatcggcaacaccaactatgactggactgaactagagaagacgaca
gaatataaaggggagtactgggctgaacacccgactatacgcctgttttgggaggcattt
catgaacttcctttagagaagaaaaaacagtttctattgttcctcacaggaagcgaccgt
atccctattctgggcatgaagagtttgaagttggtgatccagccgacgggagggggcgag
cactacctccccgtggcccacacctgttttaacctgctagacctgcctaagtacaccgac
ctggacacgctccgctccaaactactgcaggctatcgaccaaaaccagggcttcaacctc
gcataa
DBGET
integrated database retrieval system
