Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162277
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Entry
110162277 CDS
T05002
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110162277
03036 Chromosome and associated proteins [BR:
bpec03036
]
110162277
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110162277
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110162277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
110162277
NCBI-ProteinID:
XP_020782803
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MEDKKKKKEEKKKRETPQKVPDQKLKVPESAKAPGGPSHTSPGSVSPCPGPAAPSSPSAA
SASAPVAPGAGNNAKQRTSVANGQPSSSSSSSSSCGSQALQQQRYMSREVPPRFRCQQDH
KVLLKRGQPPLSSMLLGGGGADEAAAASGCSTQGEDNPNAKTAGATDSILGSSSPSPHNS
SSSCVAAVSSSTITTTISTTSTYASSTWGAGSGSQPYSQGCGKVDGMAVTDWPKACSEAV
GEGTQEQDHRGNNNNSSASWSETSTQQKGVGEENMDNSSPPSPISPSTSLNECAQSGGVV
ASQVEVGQGSAAIHNSKVSHLFQESPGANSNPSSNSSARHQQPGTTASACDGLPLHSSVI
SSFSASSQLITTNSSVSQAGAPQQQHTGTALGARSGEQQQAANLATESVDGIGPNTENGE
AKQGEESTTLSSSTAAAAASSWRAMPPIETGAQGKEGNSWGLDGGSNTQVVSQGAQVVCS
PKGDWGSTVGGGSLGHLAIGSGKGEDGSSSGDSVVTDSASPKFATMSKAWDNQKGAESDD
GKVGEWGAGGSKGEGSTAGSSGGGQKTDRTGHRQSHQINADVALQSMLSRSDLDPRVLSN
TGWGQTQIRQNVAWNLNTPSRNDKSTSLSSANVNTSTSRGANNPGSSSVREGWDGGRTSH
DVENEQGKAEGGWGVRSTETQGKGWGNEEQWADGKAGGKWGEFGKQEWGQRDSASGRGWS
DGPNRGENISEEGSAWSEGGPHRGGWGGGELGEGKSLQNWGNAKPHTASAQIPNSQVAPM
KAPTQQHQSQGQPPGAPIQGGWGSRSTPGEPPSKNPNQSTGWTSGPIPQIPGATGDSLEP
SGWEEPSPQSISRKMDIDDGTAAWGDPNRYNTKNVNLWDKNAATAQSHSQQPPPMSMQPP
AQRRQQGPQQTGPGLWGGGAQCADNGTGSWGQTSEAATGWGDSDESSKHSGWGNPSSSSA
KSGKKKYVSVNHNWGGKGEGSMAASRHSSWDEDDDCAGGVWNNAGSQGSSSSYNSGGWAH
GGKRGNLKGGGGDNWINPMSRQFSNMGLLGDDPNVDRKLESEKRGIGDYNGDIRRGGRGG
VGYRMPGPKDMGSADMGPYGEKVXLLLHLLFLHLRCCSLMPXXMYDVLMXVDLLSVFSQM
GSHGVAGSSGGMPQPRGMHQPGMHPLNPTPGLRAQVPHQFLSAQVPGPVLKQMPSPGGSM
GGVVGGVGSVGGVGGVGGGVFPPQISPQQLAMLSNIYPHMQQFHLACQLLLQHQQQPPQQ
PMFPNQRKFPQPQPVRQQSDPQQLARIMAILQQQRQQQQTGVGGQAPIGGNSKLSPSHLG
GGISKQSIVDPLQHPGMGGPLSDIHAKSQGMYSGMELSSVMGGMKDTGGQQSRFKWMMEG
HSPVPSPPDLTLNKNGALSDGPLPGGMKVRGGSPYSQYDMLAGDALGIPPQGAADSWHRT
PGSKLGHKPATSSWPPEFQPGVPWKGIQSSGDPESDPYMTPGGSVLGSPGPPGLNDTDHQ
LLRDNIGPNPSLNTSLPSPVAWPYSASDSPLSNAHSTGKYSEYKPSWPPEPIGQNKMWKT
NRNSSQLPRPPPGLTNQKQASPSPWGSGGPRLARSWGGGGVNQDSRFGQAWSDGTACRSS
CWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSSRQEAAKAQGALHMCV
LGNTTILAEFVSEEEVARYFAHSQAGGECPSPGTVVAGGAQSSSGSGVAVASSGGSSPGS
ERASGGTASSESGSGGAGDSGAGLPGVRSSSSWQNLDGTGTSSETLSAQGSGLGIFSQWS
TNGAGEGTAITGVESGRSGLWGSMTAGYPSSSSLWGAPQIEERHQMDSPAALLPGDLLGG
GADSI
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaggagaaaaagaaaagggaaaccccacagaaggtg
ccagatcagaaactcaaagtgccagaatctgccaaggcgcccggtggtccatcacacacc
agtccaggctcagtatccccctgccccggccctgccgctccttccagtcccagtgctgcc
agcgcctctgcaccagttgctcctggtgctgggaacaatgcaaagcagcggacctctgtg
gccaacggacagccctcctcctcctcctcctcctcatcttcttgtggaagccaggccctc
cagcagcaacgatacatgtccagagaggttccacccaggtttcgctgccagcaggaccac
aaagtgctactgaagaggggccagcctcccctgtcctccatgctgctggggggaggtgga
gcggacgaggctgctgcagccagtggctgcagtacacagggagaagataaccccaatgca
aaaacagctggagccacagattccattttgggttcatcttccccttcaccccataactca
tcctcatcatgtgtggctgctgtgtcgtcttctactattactactactattagtactact
tcaacttatgcaagttccacatggggggcaggctctggcagccagccctactctcagggc
tgcgggaaggtagatgggatggctgtaacggactggcccaaagcgtgttcggaggcagtg
ggcgaagggacacaagagcaagatcaccgtggtaacaataacaacagcagtgcctcatgg
agcgagacgagcacccagcagaaaggagtaggggaagagaacatggacaattcttcgcca
ccttctcctatctccccctcgacctcgcttaacgaatgtgctcagtcgggtggtgttgtg
gcctctcaggtggaagtggggcaaggatcagcagctattcacaattccaaagtctcccat
ctttttcaagagagtcctggtgccaacagtaaccccagctccaactcctctgcccggcat
caacagcctggaaccactgcttcagcttgtgatggccttcctttgcactcatctgtgatt
tcctcattttctgccagcagccaactcatcaccaccaactcatctgtcagtcaggcaggt
gccccacagcagcagcacacaggaacagctctgggtgccagaagtggagagcagcagcaa
gcagcaaacctagcaacagaatcagttgatggcattggaccaaatacagaaaatggtgaa
gcaaagcaaggagaagagagtacaactttgtcttcctccactgctgcagctgctgcttcc
tcttggagagctatgcccccgatagagactggcgctcaagggaaagaaggaaattcttgg
ggtttggatggcggctcaaatacccaggtggtatctcagggagcacaggtagtgtgtagt
ccgaagggggattggggcagcactgtgggagggggtagtttgggtcacttagcaatagga
agtggaaaaggcgaggatggtagcagtagtggtgacagtgttgtgacagactctgcatca
ccaaagtttgcaactatgtcaaaagcatgggacaatcagaagggggcagagagtgacgat
ggaaaagtgggcgaatggggagctggaggaagcaagggggaggggtctacagctgggagc
agcggtggagggcagaagacagaccgaaccggacaccgccaatcccaccagatcaacgca
gacgtggccttacagagcatgctcagtcgatcagacctggaccccagggtcttgtccaac
acaggctggggccagacccaaatccgacagaatgtggcttggaaccttaacacgccaagt
cgaaatgataaaagcacttcattgtcatcagcaaatgtaaacactagcactagtcgtgga
gctaacaatcctgggtcaagttcggtgagagaaggttgggatggaggaaggaccagtcat
gatgtggagaacgaacagggaaaggcagaaggaggctggggggtgcgaagcactgaaaca
caaggcaaaggatgggggaatgaggagcagtgggctgatggcaaagcagggggaaaatgg
ggggagtttggaaaacaggaatgggggcagagagactctgcttctgggagaggatggagt
gatggaccgaacagaggagaaaacatttctgaagagggctcagcatggagtgagggaggg
cctcatcgagggggatggggaggaggagagctgggtgaaggtaaatctcttcaaaactgg
ggtaatgcaaagccccatacagcatcagcacagataccaaacagccaagtggcgccaatg
aaagccccaacacaacagcaccaatcacagggccagccgccaggagcacccatccaagga
gggtggggcagccggtccacacctggagaacccccatccaaaaatccaaaccaaagtaca
ggctggacatctggtccgattccccagattccaggggctacaggagactctctggagccc
agcggctgggaggaaccttcccctcagtccatcagtcgcaaaatggatattgatgatggt
actgcagcatggggagaccccaatcgctacaacactaagaatgttaacctgtgggataaa
aatgccgctactgcccaaagtcatagtcagcagcctcctccaatgtccatgcagccacca
gcccagagaagacaacaggggccgcaacaaacagggcctggtttgtggggaggaggtgct
cagtgtgcagataatggtactggtagttggggccagacatcagaagctgccacaggttgg
ggggattctgatgagtccagcaaacattctggctggggtaacccttcctccagctctgct
aaatctggtaagaaaaaatatgtcagtgtcaaccataactggggtgggaaaggggaaggc
tcgatggctgcgtcacgtcattccagctgggatgaggatgacgactgtgctgggggagtg
tggaacaacgccggatcacagggaagcagctcctcctataactctggaggatgggctcac
ggaggaaagaggggcaatctcaagggaggaggaggtgataactggattaacccgatgtca
cgtcaattttcaaatatgggtcttctgggagatgatcctaacgttgacagaaagttggag
agtgaaaaaagaggaattggtgattataatggggatatacgcagaggaggtcgaggtggt
gtaggatatcgcatgcctggtccaaaagacatgggttctgctgatatggggccgtatggt
gaaaaggtttgactattattacacctgttatttttacatttgaggtgctgtagtttaatg
ccttaatgaatgtatgatgtactgatgnntgttgatcttttgtctgtcttttcacagatg
ggtagtcatggagtggctggcagcagtggagggatgccgcagcctcgggggatgcaccag
cctggcatgcatccccttaacccgaccccagggttacgtgctcaagtgcctcatcagttc
ctgtctgctcaggtgccaggtcctgtgctgaagcagatgccttctcctggtggcagtatg
ggaggagtggttggaggagtaggaagtgttgggggagtgggaggtgtcggtggaggagtg
ttccctcctcagatttctccgcagcagctagcaatgctcagcaacatctaccctcacatg
cagcagttccatctggcctgccagctactactacagcatcaacagcagccaccgcagcag
ccaatgttcccgaatcagaggaagtttccgcagcctcagcctgtgaggcagcagtcagac
ccacagcagttggcacgaattatggccattctgcagcaacagagacagcagcagcaaaca
ggggttggaggacaagcacctatcggaggaaactccaaactgtcaccttctcatctggga
ggaggcatttccaaacaatcaattgtagacccactgcaacaccctgggatgggtggtcca
ctgtcagatattcatgccaaaagtcaaggcatgtactctggcatggagctcagttctgtg
atgggaggaatgaaggacactggaggacagcagtcccgcttcaaatggatgatggaagga
cactcccctgttccatctccccctgatctcacactcaacaaaaatggtgcgttatctgat
ggtcctttacctggaggcatgaaggtgagaggaggctctccttactctcagtatgacatg
ctggctggtgatgctttggggattcctcctcaaggtgctgctgacagctggcaccgcaca
cctggcagcaaactgggccacaaaccagccacatccagctggcctccagaatttcagcca
ggcgttccgtggaagggaatccagagcagtggagacccagagtctgacccctacatgacc
cctggtggaagtgttcttggctctcctggacctccaggactcaacgacacagaccatcag
ttgctaagagacaacatagggccaaacccctccctcaacacctcgctgccttcaccagtt
gcctggccctacagtgcctcagacagccccctcagcaatgcacacagcacaggaaagtac
tcggagtacaaacccagctggcctcctgaacccatcggacaaaacaagatgtggaagacc
aatcgcaacagctcacagctgccacgcccccctcctggcttgactaatcaaaagcaggcc
tctccctccccttggggaagtgggggcccgcggttggctcgtagttggggagggggtggg
gttaaccaagactcaagatttgggcaagcttggagcgatggtacagcttgtcggagcagc
tgttggttactgcttagcaatctgacacctcagattgatggttccactttaaggactata
tgcatgcagcatggccccctgctgaccttccaccttggcttgacccagggcagtgctctg
attcgctacagcagccgacaggaagcagccaaggcccagggtgcactccacatgtgtgtc
ctaggcaacaccacaatcctggcggagtttgtcagtgaggaagaagttgctcgctatttt
gcacattcccaggctggaggagaatgtcctagcccagggacagtagtagcaggtggggcc
caaagttcttctggatcaggtgtcgctgtggccagtagtggaggtagctccccaggcagc
gagcgagcctcagggggcacagcctccagtgaaagtggcagtggaggagcaggggacagt
ggagccggtctgcctggtgtgagatcctcctctagttggcagaacctggacggtactggc
acttcttcagagactctttcagcccagggatctggactggggatattttcccaatggagc
accaacggggccggggagggaaccgccattactggagtggagtctgggagatctgggctg
tgggggagcatgactgcgggttatcccagcagcagcagcctatggggggcaccacaaatt
gaggagaggcaccaaatggacagccctgcagcactgttgcctggcgacctgctgggcgga
ggggctgattccatctga
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integrated database retrieval system
