Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162281
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Entry
110162281 CDS
T05002
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03440
Homologous recombination
bpec03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110162281 (top3a)
03460 Fanconi anemia pathway
110162281 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpec03032
]
110162281 (top3a)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110162281 (top3a)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110162281 (top3a)
DNA replication proteins [BR:
bpec03032
]
Eukaryotic type
DNA Topoisomerases
110162281 (top3a)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110162281 (top3a)
FA (Fanconi anemia) pathway
110162281 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
110162281
NCBI-ProteinID:
XP_020782808
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MNRNRTQIKRVLCVAEKNDAAKGIAEIMSSGRSRRREGLSKFNKIYEFEYHLFGQNVTVT
MTSVSGHLLGLEFKAPFQKWHSCNPVLLFDAEVEKYCPDNMIQIKRTLEKEARQCQALII
WTDCDREGENIGFEVIDVCKTVKANIQVFRAKFSEITPNSIRRACETLTEPDVNVSDAVD
VRQELDLRIGASFTRFQTLRLQKIFPASLANQLISYGSCQFPTLGFVVERFKAIQAFIPE
TFFKIKVIHEVKEDTVEFSWKRNRLFNHTACLVLYQICMEDPMATVTSVTSKPKSKWRPL
PLDTVELEKLASRKLKINAKETMKIAEKLYTQGFISYPRTETNIFPATLALAPLVELQTQ
SQAWGTFAQRVLDQPGGPNPRQGKNSDQAHPPIHPTKFTNSLQGNEGRVYEFIVRHFLAC
VSLDALGQETVVDIDIAQEKFTASGLMIIARNYLDVYPYDKWSAKIIPVYEQGSQFQPTA
IEMLDGQTSPPQLLTEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGEL
GMGLVEGYNSMGYEMSKPNLRAELEADLKLVSEGRKDKQTVLQHYIQKYKTVFIESVRKA
KKLDEALSPYLGAAQVITEEEQQDMEMPLPVRKCPNCGRDMVLKKKREGRNKYLSCTGYP
ACKTAVWFPDMVLEVNRDDSICPTCRPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDET
LREVLDLKYLKSVGGGGGNGGADSHPAAPTKTAPTRAAPSGPASTRNSNSRPLPPVAVSS
WTPPPQPPPGGIVNGRINSNDAIVCNCGQNAVLLTVRKDGPNQGRQFYKCNAGSCNFFLW
ANECAQQGSSALPPPRNSQPRPSLGFKNASGDGRSRGSGDHGGQIMCNCNEAAVTRTVQK
DGPNKGRMFHTCGKPREQQCGFFQWADENVPPSGAFGSGYNSSGFNSGAGNNNKGGNGRK
KSGDAGGNSAPAAKKPRNCGICHLPGHTRVTCPQR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaatcggactcagatcaaacgggtcctgtgtgttgcagagaagaatgatgca
gctaaaggcatcgcagaaatcatgtccagtggtagatctcggaggagggaagggctgtca
aagtttaacaaaatatacgagtttgaatatcacctctttggacagaatgttacagtaaca
atgacttctgtgtccggtcatttgttgggtttagaatttaaggcaccatttcagaaatgg
cacagttgcaacccagtactgctgtttgatgctgaggtagagaaatactgccctgacaac
atgattcaaataaagcgaacattggagaaagaagcaaggcaatgccaggccctgattatc
tggacagattgtgatcgtgaaggagaaaacattggttttgaagtaattgatgtttgcaaa
acagtgaaagctaatattcaagtttttcgagctaaattctctgaaattacacccaattca
atcagaagagcttgtgagactctgactgagccagatgtgaatgtcagtgatgctgtggat
gtgcgccaggaactggacctacggataggggcatctttcacacgtttccagacactgcga
ctacagaagatcttcccagcgtctctggcaaatcagttaatctcatatggaagttgtcag
tttcccactttgggttttgtggtagagcggtttaaagcaattcaagcatttattccagag
acctttttcaagattaaagtgatccatgaggttaaagaagatacagtggagtttagctgg
aaaagaaatcgtctgttcaaccacactgcatgcttagttctctaccaaatctgtatggag
gatcccatggcaacagtcacctcagtaaccagcaaaccaaagagtaaatggagacccctg
cctttggacactgtggaacttgagaaacttgcttcacgaaagttaaaaataaatgcaaaa
gaaactatgaaaattgctgagaagctttatactcaggggttcatcagttaccccagaacg
gagaccaacatttttcctgcaactttagccctggctcccttggttgaactgcagactcaa
agtcaagcatggggaacatttgcacagcgtgtccttgatcaacctgggggtcccaatcca
cgacagggcaagaactctgaccaggcccaccctcccatccatcccactaagttcacaaac
agtctccagggaaatgaaggtcgtgtgtatgagtttattgtacgacacttcctggcctgt
gtgtccctggatgctttgggacaggagacagtggtggacattgacattgctcaggagaag
ttcacagcttctggacttatgattattgcgagaaactatctggatgtttacccctatgac
aaatggagtgccaagattattccagtttatgagcaaggatctcagtttcagccgaccgct
attgagatgttggacggtcagacaagtcctccacagctactcactgaagctgacctgata
tccctgatggagaaacatggcattggcacagatgcaacccacgctgaccacatagagacc
ataaagagcaggatgtatgtgggacttacagcagaccagaggttcctacctggagaactg
ggaatgggactggtagaagggtataactccatgggttatgagatgtccaaaccgaacctg
cgtgctgaactggaagcagatctcaaactggtgtctgaagggaggaaggataaacaaact
gtactgcagcattatattcaaaaatacaaaaccgtgttcatcgagtctgttagaaaagct
aagaaattagatgaagccctgtccccttatttgggggcagctcaagtaatcacagaagag
gagcagcaggatatggagatgcctctgccagttaggaaatgtcccaactgtggccgtgac
atggttcttaagaagaagcgtgaaggaagaaataagtacctctcctgcacgggttatcca
gcctgtaagacagctgtgtggttccctgatatggttttggaggtcaacagagacgacagc
atctgcccaacatgtcggccccatcctgttcacatgctgaagtttaagttccgcaggggc
agccttccgcctatgatgcctttggagtttgtgggttgcattggaggttgtgatgagaca
ctgagagaagtactggacctgaagtacctcaaatcggttggaggtggagggggcaatgga
ggagcagactcccatccagctgcgcccacaaaaacagcacccaccagagcggcaccctca
ggcccagcatccaccagaaactcaaactctcgtcctttaccccctgtggcggtgtcctct
tggactcctccacctcaacctccaccgggtggcattgttaatggtagaatcaacagtaat
gacgctattgtttgtaattgtggacaaaacgcagtccttttaacagttcgcaaagatggt
cccaaccaaggacgccagttttacaaatgcaatgctggcagctgtaacttcttcttatgg
gccaatgaatgtgctcagcagggatcgtcagcactgccccctcccaggaacagccagccc
aggccttctcttggtttcaagaatgcctctggggatggcaggtctagaggctcaggggac
catggaggacagatcatgtgtaactgtaacgaagcagcggtcacacggacagtacagaag
gatggtcccaacaagggcaggatgttccacacgtgtgggaagccaagggagcagcaatgt
ggcttcttccagtgggctgatgaaaatgtacctccatcaggtgcttttggcagtggctac
aacagcagtgggtttaacagcggtgcaggcaacaataacaaaggtggaaatggaagaaag
aaatcgggagatgctggcggaaacagcgctcccgctgctaagaagccacgtaactgtggt
atctgccacttgcctggacacacccgtgttacctgcccacagcggtga
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