Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162338
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Entry
110162338 CDS
T05002
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec00260
Glycine, serine and threonine metabolism
bpec00630
Glyoxylate and dicarboxylate metabolism
bpec00670
One carbon pool by folate
bpec01100
Metabolic pathways
bpec01200
Carbon metabolism
bpec01230
Biosynthesis of amino acids
bpec01240
Biosynthesis of cofactors
bpec04981
Folate transport and metabolism
Module
bpec_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
110162338 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110162338 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
110162338 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
110162338 (shmt1)
Enzymes [BR:
bpec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
110162338 (shmt1)
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Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
110162338
NCBI-ProteinID:
XP_020782877
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSLTNGHCVSKETWDSHNKMMLEPLAVNDSEVFSIIKKEKQRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQQRALEAFGLNSEKWGVNVQPYSGS
PANFAIYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPDTGYI
DYDRLQENAKLFHPKLIIAGTSCYSRNLDYARMKQIANENGAYLMADMAHISGLIAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGLIFFRKGVRSIDAKGKETMYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQMQVLANCKALSNALIDRGYKIVTGGSDNHLILLD
LRTKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLIEEDFKKVA
EFIHKGIVLTLEVQKSMEPKATLKEFVQALSQGEKFQQQIAGIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacaaatggccattgtgtgagcaaagaaacatgggacagtcataacaagatg
atgttggaacctctcgctgtcaatgactctgaggtattctctatcataaaaaaggagaag
cagaggcaaacttatggtctggaactaattgcatcagaaaactttgcaagcagagctgtt
ctggaagctctgggttcttgtatgaacaacaagtattctgaagggtatcctggtcagagg
tactacggcggtacagaacatgtggatgaactggaaagactctgtcagcaaagagcactg
gaggcctttggactaaattctgaaaaatggggtgtcaatgtgcaaccatactctggttct
cccgcaaactttgctatttacactgctgttgtggagccccatggacgaatcatgggactg
gatctccctgatggaggtcacttgactcatggttttatgactgaaaagaagaaaatctca
gcaacctctatattttttgaatcaatgccctacaaggtaaatcccgatacaggatacatt
gactatgacagacttcaagaaaatgctaaactttttcatcccaaactcattattgcaggt
acaagctgctattctcgtaaccttgattacgctcgaatgaagcaaattgcaaatgagaat
ggagcatatctgatggctgatatggcacatattagtggattaattgcagctggagttgtt
ccctcaccatttgaacactgtgacattgtttcaacaactacacacaagacactgaggggc
tgtcgtgcaggtcttatcttcttcagaaaaggtgtaagaagtattgatgcaaaaggcaag
gagacaatgtacaatttggagtctcttattaatcaagctgtgtttcctggcctgcaggga
ggaccacacaatcatgccattgcaggtgttgctgtagctttgaaacaagccatgacacca
gaattcaaggcctaccaaatgcaggttttggccaactgtaaagccctttccaatgccctt
attgatcgtggctacaagattgtgactggtggttctgacaaccatctcatcctgttggac
ctacgtaccaaaggtactgatggagggagggctgaaaaagttttggaggcctgtgctatt
gcttgtaacaagaacacctgtccaggagataaaagtgctctacgtcccagtggcctgagg
tttggctctccagctttaacctcaagaggtttaattgaggaagattttaagaaagtcgca
gagttcatccacaaaggaattgtgttgacgttggaggtgcagaaaagcatggagcccaag
gcaaccctcaaggaatttgttcaagccttgtcccagggagaaaagtttcagcagcagata
gctgggatccgggctgaggtggaggcctttgctggtcagttcccaatgcctggcctacct
gagctgtag
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