Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162630
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Entry
110162630 CDS
T05002
Symbol
mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110162630 (mkrn1)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110162630 (mkrn1)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110162630 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_PARP12
zf-rbx1
zf-CCCH_9
zf-CCCH_RBM22
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110162630
NCBI-ProteinID:
XP_020783188
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAEAAAASTAAPVGTGGWTKHVTCRYFMHGLCKEGENCRYSHDLMSSKPANMICKFYQKG
TCAYGERCRFEHSKVKEELPPKTLPCAQPPSDPQSRPETRPESRPETRPAPDWVNAAEFV
PGQPYCGRGSAKAESCVALIEDAAAEDTEERRTQGKTLCPYAAVGECRYGLNCAYLHGDV
CDMCGLQVLHPTDTSQRSEHTKACIEAHEKDMELSFAVQRSKDMMCGVCMEVVFEKANPS
ERRFGILSNCSHCYCLKCIRKWRRAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDDKQ
KLIQKYKDGMGTKACRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRQRPSGGHRSRA
SRRTPLWDLLDERDSTDSLDDEEDLVTFELSEMLLMLLAAGTDEDATDSEDEWDLFHEEL
DDFYEIYL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcgtccacggcagctccggtggggacgggcggctggaccaaa
cacgtaacctgcaggtatttcatgcacggtttgtgtaaagagggggagaactgccgctac
tctcacgacctcatgagcagcaaacccgccaacatgatctgcaagttctaccagaagggg
acgtgtgcgtacggagagcgctgcaggtttgaacacagtaaagtgaaagaggagctgcct
ccgaagacgctgccgtgcgcccaaccgccatcagacccacagtccagaccagagaccaga
ccagagtccagaccagagaccagacctgctccggactgggtcaacgcagcagagtttgtc
cctggtcagccgtactgtgggagaggctcggcgaaggcggagtcgtgcgtggcgctcata
gaggacgcggcggcggaggacacagaggagcgcaggacccaggggaagacgctgtgcccg
tacgcggcggtgggcgagtgtcggtacggcctgaactgtgcatatctccacggcgacgtc
tgcgacatgtgcgggctccaagtgctccaccccacggacacctcccagcgctcagagcac
acaaaggcatgcatagaggctcacgagaaggacatggagctgtcgtttgccgtgcagcgc
agtaaagacatgatgtgcggcgtgtgcatggaggtggtgtttgaaaaggccaatccgagc
gagcgccgcttcgggatcctgtccaactgctcccactgctactgcctcaagtgcatccgc
aagtggaggagagccaagcagttcgagagcaagatcatcaagtcgtgtcccgagtgtcga
atcacgtcaaacttcgtgatcccgagcgagtactgggtcgaagacaaagacgacaaacag
aaactcatccagaagtacaaggacggaatggggactaaagcgtgccggtacttcgacgaa
ggccgtgggacgtgtcctttcggttcaaactgtttttacaaacacgcgtttcccgacggt
cgcctggaggaggcgcaaccacagagacagaggccgagcggaggacacaggagcagggcc
tccaggcgcaccccgctctgggacctgctggacgagcgcgacagcacggactctctggac
gacgaggaggacctggtgacgtttgaactcagcgagatgctcctgatgttgctggcggcg
gggacggacgaggacgccacggactcagaggacgaatgggacctgttccacgaagagctc
gacgacttctacgagatctacctatag
DBGET
integrated database retrieval system
