Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162645
Help
Entry
110162645 CDS
T05002
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110162645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110162645
03036 Chromosome and associated proteins [BR:
bpec03036
]
110162645
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110162645
Coactivators
SAGA/TFTC/STAGA complex
110162645
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110162645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFH
Motif
Other DBs
NCBI-GeneID:
110162645
NCBI-ProteinID:
XP_020783203
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKAPAASFTDGKRETGPAGASQFSGK
PQQGHPKAGSNREPSAAAADGPAASGGALAASTAAGTAGVSAISVAPQPSAPAPFHPAAV
PTSSLAPTPASPGLQSLNGAPGSVKLLSSPSLPSTQQPGTVINAVSGSTIMASQFTGQSS
PTVALQRHPSPVPNQNGVDPKSAPSPNTSTAQVLNHTNQLIHNKIMPQPQPVSGNSVILA
NTPPLTTQIAQTGATGGVKPAVNGLAQPAVAVVRPPGASTGVAATGVQPQRPTLGVTTAT
TRAPAPQAPIAVRPQQQTTIQLPPGFTMPPAISVAPQPSAPAPFHPAAVPTSSLAPTPAS
PGLQSLNGAPGSVKLLSSPSLPSTQQPGTVINAVSGSTIMASQFTGQSSPTVALQRHPSP
VPNQNGVDPKSAPSPNTSTAQVLNHTNQLIHNKIMPQPQPVSGNSVILANTPPLTTQIAQ
TGATGGVKPAVNGLAQPAVAVVRPPGASTGVAATGVQPQRPTLGVTTATTRAPAPQAPIA
VRPQQQTTIQLPPGFTMPPGMVLVRTETGQLVMVPQQVLAQAQAKTQQNQTVNLQRPATP
TAAGGTIRVSTPTSAPGTPTVRLASPQTRMTQPASSTVQKALSAAPGGSAVSVKMSTPQK
PPTVITAGGTVLNKTSPSPSAAVTAPARVNVVSQEMQENVKKCKNFLATLIKLASHNSPS
PDTSKNVKGLVQDLLL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcactgaggtggacgagaaggcg
gtcagcgacttggtgggctccctggagtcccagctcggcgacagaaaggctcccgctgct
tcatttaccgacgggaaacgggagacgggcccggccggagcgagccagttctcagggaaa
ccgcaacaagggcatccgaaagcgggctcaaaccgggagccgtccgccgctgctgccgac
gggcctgctgcgtccgggggcgcgctcgccgcctctactgccgctggaaccgccggagtc
tcggctatttccgtggcccctcagccctctgctcctgcgcccttccaccctgctgcggtc
cctacctcctccctggctcctaccccagcctcccctggcctccaaagcctaaacggtgcc
cctggatcagtcaaactcctctcctctccctccctaccatctacacaacaaccaggaact
gttattaacgccgtcagtggttctactatcatggcttctcaattcaccggtcaatcttct
ccgactgtcgctttacagaggcatccaagccctgtcccgaatcaaaatggagttgatccg
aaaagcgcaccctctccaaacacatcaacagctcaagttttgaaccacacaaaccagcta
atccacaacaaaataatgccccaacctcaacctgtgtctgggaatagcgttatcctagcc
aacacgcccccattgactacgcagatagcccaaacaggagcaacaggaggtgtaaaacca
gcggtgaatggattggcgcagcccgctgtagcagtggtgagacctccaggagctagcact
ggtgtggcggcgacgggtgtccagccacagaggcctacgctgggggtaaccacagccacg
accagggccccggctccacaagcgccaatagcagtgaggccgcaacagcaaactaccatc
cagctaccaccggggttcactatgccaccagctatttccgtggcccctcagccctctgct
cctgcgcccttccaccctgctgcggtccctacctcctccctggctcctaccccagcctcc
cctggcctccaaagcctaaacggtgcccctggatcagtcaaactcctctcctctccctcc
ctaccatctacacaacaaccaggaactgttattaacgccgtcagtggttctactatcatg
gcttctcaattcaccggtcaatcttctccgactgtcgctttacagaggcatccaagccct
gtcccgaatcaaaatggagttgatccgaaaagcgcaccctctccaaacacatcaacagct
caagttttgaaccacacaaaccagctaatccacaacaaaataatgccccaacctcaacct
gtgtctgggaatagcgttatcctagccaacacgcccccattgactacgcagatagcccaa
acaggagcaacaggaggtgtaaaaccagcggtgaatggattggcgcagcccgctgtagca
gtggtgagacctccaggagctagcactggtgtggcggcgacgggtgtccagccacagagg
cctacgctgggggtaaccacagccacgaccagggccccggctccacaagcgccaatagca
gtgaggccgcaacagcaaactaccatccagctaccaccggggttcactatgccaccaggg
atggtgttggtgcgcacagagactggtcagctggtcatggttcctcagcaggtcctggct
caggctcaggccaaaactcaacagaatcaaaccgtcaacctccagagacctgccactcct
acggcagcagggggcactatacgggtcagcacacccacatcggctcctggaactcccact
gtgcgactggcctctcctcagaccagaatgactcaaccagcctccagcacagtgcagaag
gcactcagtgctgcccctggaggctctgcagtgtcggtgaagatgtccaccccacagaag
ccccctacagtgatcacagccggagggaccgtcctgaacaaaaccagtccaagtcccagc
gcagcggtcactgctccggctcgggtcaatgtcgtctcacaggaaatgcaggaaaatgtg
aaaaaatgcaagaactttttggcgacgctgatcaaattggcgtctcacaactctccgtct
ccagatacctccaagaacgtcaaaggcctggtgcaggacctgctcctctaa
DBGET
integrated database retrieval system
