Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162681
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Entry
110162681 CDS
T05002
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110162681
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bpec03310
]
110162681
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110162681
Nuclear receptors [BR:
bpec03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110162681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110162681
NCBI-ProteinID:
XP_020783242
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGKPDSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDFAPGSGFFPYCSFSNGDSSPTVSMAELEHLAQNISKSHMETCQYLREELQ
QMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLS
EDEMALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQAMPVDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtcatttcagcgatgaaagctcaaatcgaaataattccctgcaagatt
tgtggagacaaatcgtcaggcatccattatggagtgatcacatgtgaaggctgtaagggc
tttttccgcaggagtcaacagagcaatgcagcctactcgtgcccacgtcagaagaactgc
ctgatcgaccgcaccagccgcaaccgctgccagcactgccggctccagaagtgcctggcc
gtgggcatgtcccgggatgcggtgaagtttgggcgaatgtcaaagaagcagcgcgacagc
ctgtacgccgaggtgcagaagcacaggctccagcagcagcagcgtgaccaccaacagcag
ccgggggaggcggagcctctcacccccagctacggcctctcagccaatgggctcacagag
ctgcacgacgacctcagcggctacatggacggccacacccccgacggtaaaccggactcc
gcggtcagcagcttctatctggacatccagccctcgcccgatcagtccggcctggacatc
aacggcatcaaaccagagcccatctgtgactttgcccctggctccggcttcttcccctac
tgctccttctctaatggagacagttcccccaccgtgtccatggctgaactggagcatttg
gcccagaacatctccaagtcgcacatggaaacgtgtcagtatctgcgggaggagctgcag
cagatgacctggcaggccttcctgcaggaggaggtggagagctaccagagcaagcctcgg
gaagtcatgtggcagctgtgtgcgatcaaaataacagaagccattcagtatgtggtggaa
ttcgccaagcgcatcgacggcttcatggagctgtgccagaatgatcagatagtgctgctg
aaagcaggctctttggaggtggtgttcgtcaggatgtgtcgtgcctttgactcacagaat
aacacagtgtactttgatgggaaatacgctggaccagacgtcttcaagtctttaggctgt
gacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctgtct
gaggatgagatggcgctgttctccgccttcgtgctgatgtctgccgatcgctcttggctc
caggagaaggtgaaggtggagaagctgcagcagaagatccagctggctcttcagcacgtt
ctgcagaagaaccacagagaagacgggattctcacaaagttgatatgcaaagtgtctacc
ctgcgcgccctgtgcagccggcatacagagaagctgacggcgttcaaagcaatataccca
gacattgtgcgcgcccacttccctccgttatacaaggaactcttcggctcggactttgag
caggccatgccggtggacgggtag
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