Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162795
Help
Entry
110162795 CDS
T05002
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110162795 (trmt13)
Enzymes [BR:
bpec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
110162795 (trmt13)
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110162795 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
110162795
NCBI-ProteinID:
XP_020783352
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MIKLTGRPYRGDHTVDSRTEHTVRRGQSVSNMAAPVPGRCAFFVERKKRFCKMIVGRGKR
FCGEHAAMEEGAGSRRIVCPLDPKHTVSEDKLEKHLKKCNSREKPKPVYYVEDRNAGSGD
EAQNAEVSLSERSRTELQGLLDKLKTACQGLACDPEEKVLSHPALQEELNNPKNGESAHK
HLRQQASILAHMAALGLLRGGRCFVEFGAGRGKLSHWIHEALRGQPELQVLLVERSSTRF
KVDGKHADGEEEFERLQVDIQHLDLGGVPLLREKGLPVVGVGKHLCGAATDLALRCLLEK
PHYHESKEPPTKRLKSTDPCPEAAQTCSPAEPCGPALAVVGLTVALCCHHRCQWRHYVGK
DLFRQRGLGAEDFSAFCRMSSWATCGLRATNHNTSAPNQTNQNEERQDAPDQKVEEEEHE
PAEETDAVNGFLSPWERKRVGRLCKLLIDCGRLHYLQRKGFTGRLSRYVSSQVTLENVLL
TAVPNAHPDAPTDAPTDTPKDAQEDSHSDAQQEDSHSDAQQEDSHSDAQQEDSHSDAQQE
DSQSVLSQPKHTTTPKTQDPTPRDTPL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactaacgggacgaccataccgtggggatcataccgtggacagtcgtacggag
cacactgtgaggcgtggacagtccgtgtccaacatggcggcgcccgtgcctggccggtgt
gcgttcttcgtggagagaaagaagcgcttctgtaagatgattgtgggcagaggaaagcgc
ttctgtggcgagcacgcagcgatggaagaaggagctggcagccgcaggattgtgtgccca
ctagacccaaagcacactgtgagtgaagacaagctggagaagcatcttaagaagtgtaac
tccagagagaagcctaaacctgtgtactatgtggaggacaggaacgcggggtcaggggat
gaggcccagaatgcagaggtgagtttgtcagagcgcagccgaacagaactgcagggactg
ctggacaaactgaagaccgcctgtcaaggactggcctgtgacccagaagagaaagtcctg
tcccaccctgctctacaggaggaactgaacaaccccaaaaatggagagtcagcccacaaa
caccttcgacagcaggcatccatcctggctcacatggctgcactggggctgcttcgaggg
gggcgctgttttgtggagttcggagcaggccgaggcaaactgtcccactggatccacgaa
gctctcaggggtcagccggagctacaggtgctgctagtggagaggagcagcacacgcttc
aaggtggatggtaaacatgcagatggagaagaagagtttgagcgcctccaggtggatatc
caacacctggacctgggtggagtgcctctgctcagggagaaggggctgcctgtggtggga
gtggggaaacacctgtgtggagcagccacagatctggctctgcgctgtttgttggaaaaa
ccccactatcatgagtctaaagaacctccaaccaaacgactcaaatccactgacccctgc
ccagaagcagctcagacctgttcccctgcagagccttgcggtcctgccctggcggtggtc
ggcctcacggtggcgctgtgctgtcaccaccgctgccagtggaggcactacgtgggcaaa
gacttgttcagacagagagggctcggagcggaggatttctcagccttctgccgcatgtcc
agctgggccacatgtggactcagagccaccaatcacaacacttcagctccaaatcagacc
aatcagaatgaagaacgccaggatgcacccgatcagaaagtcgaggaggaagagcatgaa
ccagcagaggagacagatgctgtgaatgggttcctgagcccatgggagcgcaagcgtgtg
ggccgtttgtgtaagctgctcatagactgtgggcgacttcactacctccaacgcaaaggc
ttcactggacgtttgagcagatacgtgagctctcaggtcaccctggagaatgtcctgctc
actgctgtccccaatgcacatccagacgcgccaacagacgcgccaacagacacgccaaaa
gacgcacaggaagactcacactcagacgcacaacaggaagactcacactcagacgcacaa
caggaagactcacactcagacgcacaacaggaagactcacactcagacgcacaacaggaa
gactcacaatcagtcctgtcacagccaaaacacaccacaactcccaagacccaagaccca
acacccagagacacacctctgtga
DBGET
integrated database retrieval system
