Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163083
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Entry
110163083 CDS
T05002
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110163083 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110163083 (cnot3)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110163083 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110163083 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
DUF4407
Motif
Other DBs
NCBI-GeneID:
110163083
NCBI-ProteinID:
XP_020783669
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETVSIVERETKTKAYSKEGLGLAQKVDPAQREKEET
GQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHIRMLE
TILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATSPS
GQGNMEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDCEVSQSPVKNG
TPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPSVPTSSGLIGSFSSAVQQHQHPPATPS
QTVTQPPQSKPSVPGHSTPSPPTNPLLPSSSTPSLPTPSSPSSSAPSLPSPSPASSLSLG
LGLGLSKGLTGSSSGQMAGLGLSHAPSLNSMSGLISGSTPAPYAQAAASGALGLSSTSQS
SISAESTSISTSSVTTNGTGSGLGLLGSSPAHSSLSSSILGLVPGQSVAPGAPQVPPVSS
PPGVVGLMGGNGGSVGVVGGVNSAPARPPSGLKQNGSTSIVLCSVFSGYSAVVAESSTES
ALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTPGGGSLLNGPH
SYSQASEGLKAPEPLSSLKAMAERAALGSGLDGEISNLHLTDRASLDIFSGSSAAPGTPA
APQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNP
CPTLPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHTKY
MMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaactacaaggtgaaatcgatagatgtttgaaaaaagtagcagaa
ggtgtagaacagtttgaagacatctggcaaaagcttcataatgcagccaatgcaaaccaa
aaggaaaagtatgaggctgacctcaaaaaagagattaaaaaattacagcgactaagagac
cagataaaaacatgggtcgcgtcaaacgagatcaaagacaaaaggcagctagtggagaac
cgcaaactaatagaaacggtaagcattgtggagagagagacaaaaacaaaagcgtactca
aaagaaggtttaggactcgctcaaaaagtggatccagctcagagggaaaaggaggagacg
gggcagtggttaacgaatacgatagacacgctaaacatgcaggtggatcagtttgaaagt
gaagtcgaatctctctcggtccaaacaagaaaaaagaaaggagacaaagagaaacaagat
cgcattgatgaactaaagcggttaattgagaggcatcgatttcacattcgaatgttggag
accatattacgcatgttagacaacgactctgtgccagtggatgctattcaaaagattaag
gacgacgttgagtactacatagattcctctcaagacccagactttgaagagaatgaattc
ctgtacgacgacttggatctagaggacatccctgcagcactagtggccacgtctccgtcg
ggtcagggcaacatggaggacgagatgtacctccactccagcagcactcccacctccacc
acctcctcctcccccatccctccatccccagccacctgcactgctgagaactcagaggac
gataagaaacggggccgctcgacagactgtgaagttagtcagtcacctgtgaaaaatggc
accccatccctgctctcctccttttcctcttcgacgacctctggctcgtcatcctcctct
tctcttgtttccatggcgagtgttgtcgggggcattccttcggttcctacgagcagcggt
ctcatagggagcttcagcagcgcggtgcagcagcatcagcaccctccagcaacaccgtca
cagacagtgacgcaaccgcctcagtccaaaccctctgtcccgggtcacagcacccccagt
ccccccaccaaccccctcctgccctcctcctccaccccctctctgcccacgcccagctct
cccagctcctccgccccctctttgccctcaccctcccccgcctccagcctgagcctgggg
ctgggcctggggctgagcaaaggtctgacggggagcagctcgggtcagatggcaggactg
ggcttaagccacgccccctcgctaaactccatgtcagggctgatctcgggctccacgcca
gcaccgtacgctcaggctgccgcctctggagctctggggctgagcagcacgtcacagtcc
agcatttcagcggagagcacctccatctccacctccagtgtcaccaccaatgggacgggc
tctggcctgggtctgctgggctctagcccggcgcacagctctctgagcagcagcattttg
ggactggtcccaggacagagtgttgccccaggggcccctcaggtgccccctgtcagctcg
ccccctggtgtggtggggctgatgggaggaaacggaggcagtgtcggagtagttggagga
gtcaactctgcaccggccagaccaccaagcggactcaaacaaaatggtagcacaagtatt
gttctctgttctgtgttttcaggttacagcgcggttgtggcagagagttctacagagtca
gctctgagcacaccgagccagtctcaaagcagccagccttcatcactcagctcctctacc
agtcagccaatggacaatgggcccagtttaattagctccatcactctgcctccaagctct
ccgtccccgtccttctctgacagcacaccagggggtgggagtcttctcaacgggccccac
tcgtactctcaagcttctgagggcctcaaggccccggagcctctgagttctctgaaggcg
atggcggagagagcagctctgggctcaggtctggacggagagatcagcaacctgcatcta
acagacagagcgtctttggatattttctctggctcgtctgcagcgcccggcacacccgct
gctccacaaccgtccgtctctgaggtcagcatcccgccgtcgctcggggtgtgtcctctg
gggccaacgccgctgcccaaagaccaactgtaccagcaggccatgcaggagtctgcctgg
acacacatgccgcacccctcagactctgagaggatcaggcagtacctgatgaggaatccc
tgtccgacgctgccatttcaccaccaggtgccgccacatcactctgactctatcgagttc
taccagagactgtccacagaaacactgttcttcatcttttactacctggagggcacaaaa
gctcagtatctgtcagccaaggctctaaagaaacagtcgtggaggtttcacaccaagtac
atgatgtggttccagagacacgaggagcccaagaccatcacagatgagtttgagcagggc
acttacatttactttgactatgaaaaatggggccagcggaaaaaggagggctttaccttc
gagtacaggtacctggaagaccgcgatctacagtga
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