Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163173
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Entry
110163173 CDS
T05002
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110163173 (rlim)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110163173 (rlim)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110163173 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
DUF2852
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
110163173
NCBI-ProteinID:
XP_020783770
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEGSDSTDQSGNDQPDSQRRSQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELISRLQQIKHGLNQQNNPANLQIGEDVGDQPGNPEEPVNGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAVDGEQVAPDGQEEEVENADPPAPM
ETDVVEEPVVEELAVIVEPEPEHEQVSQHVLQEPPSSPEVAVVQTPLSSPSPSPRRGQRR
PRSRSPEPRRTRARTARSRSPLTLELPYVLPTLHNAPSTQSSNSTNSNPPVPQVEGSSRT
RQHISARQSPMDEDLQPPQASPEPVAEPINPDSQEGEVTAADGSGSGRRPPTIMLDLQVR
RVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPI
RRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSTDSNRGTNTPSDMAEADLNN
GEAPSVGETVAIDGDQQSAPDGARARTVEGNSDEGDAPPPAAGGRARPRPPISFEEPSSL
PFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKL
PCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatcagacagcacagatcaaagtggcaatgaccaaccagactcccagcggaga
agtcagcttgaccgcctggacagagaagaggctttttaccagtttgttaataatctcagc
gacgaggattatcgtcttatgagggacaacaatcttttgggaacaccaggtgaggtgacc
gaagatgagctgatcagtagacttcagcaaataaaacatggcctaaaccaacagaataat
cctgcaaatttacagattggagaagatgttggcgatcaaccaggaaaccctgaggaacct
gtcaatggagatagccttttagactggctgaacacagtgaggcgcacaggcaacactaca
aggactggtcatcgtgggaatcagtcctggcgagctgtaagtcaaaccaatccaaacagt
ggcgactttcgcttcagtctggaaatcagtgtaaaccgtaacttggctgtggatggtgag
caggtggctcctgatggtcaagaggaagaagtggaaaatgcagatcctccagcccctatg
gagacagatgttgtagaagaaccagtggtggaggagttggctgtaattgtggaaccggag
ccggaacatgaacaagtttcacaacatgtacttcaagaaccaccctcgtcacctgaggtt
gctgtcgtacaaactccattgtcttccccgtcaccttctccacgcagaggacagagaaga
cctcgcagtcgcagtcctgagccccgcagaacaagggcacgaacagctagaagtcgttcc
cctctaacacttgagttgccatatgttcttccaactctacataatgcccctagcacccaa
agctcaaattctactaatagcaatccacctgtacctcaggttgagggcagttcccggact
cgacagcacatttctgctagacaaagccctatggatgaagatcttcagccaccccaggct
tcaccagaacctgttgctgagcccatcaaccctgattctcaggagggggaggttactgct
gcagatgggagtggaagtggccgacgtcctcccaccataatgctcgatctccaagtgcgt
cgcgtgcgtccaggggagtaccgccaaagagacagcattgcaagtcgcactcgctcccgc
tctcagaactcaaacaatacctttctttatgaaagcgagcgtggtggtttccgccggact
ttctctcgctctgagcgtgctggtgtcaggacttatgttagcaccattcgcatccctatc
aggcggatctctgatgcaggtttaggagaggctacatctatggcattgcagtctatgatc
cgtcaaattatgacgggttttggggaacttggctacctcatggattcagattctgattca
actgattcaaatcgtggtaccaacactccgtcagacatggctgaagctgacctcaacaat
ggagaagcacccagtgttggtgagactgttgccattgatggggaccagcaatctgcccct
gatggggctagggcacggacagttgagggaaattcagatgaaggcgatgctccaccccca
gctgcaggtggtcgggcaagacccaggcctcccataagttttgaggagcccagttctctt
cctttccttcgcctcgcccactttttccttctaaatgatgacgatgaagaccaaccccaa
ggactaaccaaagaacaaattgataacctctccatgcgcaactttggtgagagcgatgcc
ctaaagacttgcagtgtttgcataacagaatatgcagaaggcaacaagctccgtaagttg
ccctgctctcatgagtaccatgttcactgcattgaccgttggttgtctgaaaattccaca
tgtcccatttgccgcagagctgtcctagtgtcagccaatcgggagagcgtggtttag
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integrated database retrieval system
