Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163381
Help
Entry
110163381 CDS
T05002
Symbol
ssrp1
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110163381 (ssrp1)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110163381 (ssrp1)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110163381 (ssrp1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110163381 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
110163381
NCBI-ProteinID:
XP_020783995
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MGDTLEFNEIFQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIAASDLNQAQWRRVCLGH
GIKLGTSSGHIYKYDGFKDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAMFXGPLLS
FDINDNPAFEIPLSNVSQCATGKNEVTLEFHQTDETEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVERKFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDEESDES
FNPGEEDDDIAEEYDSKASASESSEEGSGSEDESAKKKKEKKKEKKVVKEKKERKPRKEK
KQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKEEKEEWETK
AGEAKRQYDKAKKEYKESGGGESSMPKKEKKKAGKKEERKRKSGGGDKERERSGNDSFKS
KEFIETSEESSSESDHKSKSKRKKESEDEEEEAASTPPTSEEESD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagtttaatgagattttccaggaagtgaaaggctcctggaatgat
ggtcgtcttcgattcagcaaacagaatgttgtttataaaagtagtaagaccggtaaggtg
gacagcatcgcagcttcagacctaaaccaggcccaatggagacgagtgtgtttgggtcac
ggtatcaagcttggcaccagctctggacacatttacaaatatgatggcttcaaggataca
gactttgaaaagatctcggagtttttcaaggctaactacaaagtggagctcacagagaag
gatatgtgtgttaagggatggaactggggaacagcaatgttttgaggaccactgttatct
tttgacattaacgataacccagcatttgagatcccactgtccaatgtatcccaatgtgcc
actgggaaaaatgaagtgactcttgagtttcaccaaactgacgagacagaggtgtcattg
atggaggtgcgattctatgtccccccaagtcaatcagatgagcggcaagaccctgtggag
gcttttgcccagaatgtgttgtctaaggctgatgtgatccaagccaccggggatgctgtg
tgtatcttcaaagagctacaatgtcttacacccagaggaagatatgatattcgcatctat
ccaacatttcttcacctgcacggaaagacctttgattacaagattccttacacgactgtc
ctcagactttttctgctgcctcacaaagaccagaggcagatgttttttgtgattagcttg
gatcccccaattaaacagggtcagacccggtatcattttcttattttgctattttcaaaa
gaggaggacatcaacctgacacttaacatgagcgaggaagatgttgagcgtaaatttgaa
ggtaaactcagtaagaacatgtccggttcactttatgaaatggtgagtcgagtgatgaag
gcgctggtcaacaggaaaatcacagtgccaggaaatttccagggccactctggtgctcag
tgcatcacctgctcgtacaaagcttcctctgggctgctgtatccattagagcgtgggttc
atctatgtgcacaagcctcctgttcacctgcgttttgaggaaatttcatgtgtcaacttt
gcccgaggcaccaccacgacacgctcctttgattttgagattgagaccaaacagggaaac
cagtacaccttcagcagcattgagagagaggagtatggcaagttgttcgactttgtcaat
gctaagaagcttaacatcaagaacagaggattcaaagagggcatgaaaggcaaaattgat
gagtacagcgactctgatgaagaccaacatgatgcctacctggagaggatgaaggccgaa
ggcaagataagagaggagggcaacgacagcgatgattcagatgaagaaagtgatgagtca
ttcaaccctggagaggaggatgatgacattgcagaagaatacgacagcaaggcttcagcc
agtgagagcagtgaagagggcagtggaagtgaggacgagagtgccaagaagaagaaggaa
aagaagaaagaaaagaaggtagtgaaggagaagaaagagaggaaaccacgcaaagagaag
aagcagaaagatactggcggtccaaagagaccaatgagtgcctacatgctgtggctcaac
tccagccgagagcgcatcaagtctgagaacccaggcatctctataactgagatctccaag
aaggctggagagatgtggagacagctgggaaaagaggagaaggaggagtgggagaccaaa
gctggagaagcaaagagacagtatgacaaagcaaagaaagagtacaaagaaagtggtgga
ggagaaagttccatgccaaagaaggagaagaagaaagctgggaaaaaagaggagcgaaaa
agaaagtcaggtggtggagacaaagaacgagagagatcaggcaacgacagtttcaagagc
aaagagttcattgagaccagtgaagagagttcatcggagtctgaccacaaaagcaaatcc
aagaggaagaaggaatctgaggatgaagaggaggaagctgcatccacacccccaacctct
gaggaagagtcggactaa
DBGET
integrated database retrieval system
