KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163551
Entry
110163551         CDS       T05002                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110163551 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpec03021]
    110163551 (taf5l)
   03036 Chromosome and associated proteins [BR:bpec03036]
    110163551 (taf5l)
Transcription machinery [BR:bpec03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110163551 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     110163551 (taf5l)
Chromosome and associated proteins [BR:bpec03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110163551 (taf5l)
    STAGA complex
     110163551 (taf5l)
    TFTC complex
     110163551 (taf5l)
    SAGA complex
     110163551 (taf5l)
    SLIK complex
     110163551 (taf5l)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EIPR1 RMC1_N Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR19_1st Nbas_N PEP5_VPS11_N PROPPIN WD_LRWD1 TRIP13_N
Other DBs
NCBI-GeneID: 110163551
NCBI-ProteinID: XP_020784182
LinkDB
Position
Unknown
AA seq 601 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDSSLKTAKLCQTPEEMAASITVQTESGCANVVSAA
PCQSDPQQYEAQFSRLHSFLSDTDLPWAREVSLVLFPLFVYLHLDMVRSGLKSAVDSFYG
RFHSLFLQEPEQRPVVEQLRHVLSPQDISSSSKLSAFLENKFVVRLSEAAYGYLLRYLQS
EDNSALCRALSAQLQLEVTTAPRTDYQLYGAPGAAASAPNALSSWAGVDGAEGGAEGVEV
PAEIPQNEAALDALQDVIKKVREGPPSLTTVCFYSFHHTEALLNAAEVSPDSRLLAAGFD
SSAVKLWSLRARKLKAKPHQVDVSRIRLACDVLEEQFEEEEVSGSEIQTLRAHSGPVYRA
CFLSDSSGLLSCSEDATLRYWDLSSFTNAALYRGHTYPVWDLDISPSSLYFASASHDRTA
RLWTFSRAHPLRIYAGHLADVDCVKFHPNSNYIGTGSTDKTVRLWSTQQGASVRLFTGHR
GPVLALAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTGLSFSPDSSLVASS
SMDNSVRVWDIRNSHGAAPPDGSSSEMVGLYTGNTSSVLNVQFMACNLLVVTGTAPEKSE
Q
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgaagcgcgtgcgtacggagcagattcagtacgctgtggctcagtacttgaagaggagg
cagtatgtggacaccgacagctcactgaaaacagccaaactctgccagacgccggaggag
atggcagccagcatcacggtgcagacagagtcgggctgtgcgaacgtggtttcagcggct
ccgtgtcagtccgaccctcagcagtacgaggctcagttctccagacttcactcttttctc
tcagacacagatctcccgtgggcgcgggaggtgagcctggtcctcttcccgctcttcgtt
tacctgcatctggacatggttcgctccgggctgaagtccgcggtggacagtttctacggc
cgcttccactcgctgttcctccaggagcccgagcagaggcccgtcgtggagcagctccga
cacgtcctctcgccgcaggacatcagctccagctccaaactctcggcttttctggagaat
aagtttgtggttcgtctgagcgaggcggcgtacggatacctgctgcgatacctgcagagc
gaggacaacagcgccctctgcagagcactgagcgcacagctgcagctcgaggtgaccacg
gccccgcgcacagactaccagctgtacggggctccgggcgccgccgcctccgcccccaac
gcgctctcgtcctgggcgggggtggacggggcagaggggggcgcggagggcgtggaggtc
cccgcggagatcccccagaacgaggccgctctagacgcgctccaggacgtcatcaagaag
gtccgagaaggcccgccgtccctcaccaccgtgtgcttctactccttccaccacacggag
gcgctgctgaacgccgccgaggtctcccccgacagtcggctgctggcggcggggttcgac
agctccgccgtgaagctctggagcctccgagcgcggaaactcaaagccaaaccgcaccag
gtggacgtgtcgcgcatcagactggcctgcgacgtgctcgaggaacagtttgaggaggag
gaggtgagcggcagtgagatccagacgctgcgcgctcacagcggtcccgtgtaccgcgcg
tgcttcctgtccgacagctcggggctcctgtcgtgctcggaggacgcgacgctccggtac
tgggacctgtccagcttcaccaacgcggcgctttaccgcggccacacgtaccccgtctgg
gacctggacatcagcccgtccagcctctacttcgccagcgcctcgcacgaccgcaccgcg
cggctctggaccttctcgcgcgctcaccccctgcggatctacgccggacacctggccgac
gtcgactgcgtcaagttccaccccaactccaactacatcgggacgggctcgacggacaaa
acggttcgcctgtggagcacgcagcagggggcgagcgtgcgcctcttcaccggccaccgc
ggccccgtcctggctctggccttttcccccaacggcaaatacctggcgtcggccggcgag
gaccagcgggtgaagctgtgggacctggcgtcggggactctcttcaaagacctgcgcggg
cacacggacagcgtcaccggcctgtcgttcagccccgacagcagcctggtcgcctcctcg
tccatggacaactcggtgagggtctgggacatccggaattcccacggcgccgctcccccc
gacggatcgtccagcgagatggtcggactttacacggggaacaccagcagcgtgctcaac
gtgcagttcatggcctgcaacctgctggtggtgaccggtactgcgcccgagaaatcagaa
cagtaa

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