Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163628
Help
Entry
110163628 CDS
T05002
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110163628 (dhx34)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110163628 (dhx34)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110163628 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
ResIII
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
110163628
NCBI-ProteinID:
XP_020784283
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MDSGRGRESRSWDWDSPRCRAELDEIFFRQHDYIQSGTPEHKDFWAFFERFQRFKTKREM
SGYCGSENEIVKKSKHHRELDLGLPTDYDARYKINVSVCTKDIEERLGKQHKGGRSFSGP
GREEIAECRLSYLHFLDFSQKQSFNKLAKLRREQKNLPIFQYKDRIIELVRRHPVVVVAG
DTGCGKSTQVPQYLLSSGFTQIACTQPRRIACISLAKRVSFESLNQYGSQVGYQIRFETT
RTTATKLIFLTEGLLLRQIQQDRELSQYQVLIVDEVHERHLHCDFLLGVLRSLLENHSDL
RLILMSATINIKLFSNYFNSAPVLQVPGRLFPIQVTYRPIPPEEQASRSEKLDPRPYLRI
LQGIDQRYPPEERGDLLIFLSGLTEISTIQEACQIYATHTRRWIILPLHSTLSLAQQDKV
FDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSYDPKAKMQRLQEFWISRASS
EQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPLSFVF
IDPPPAASIQTAVTYLKDQGALDSQGELTTIGTLLAQLPVDVVIGKMLVLGSVFNLVEPV
LTIAAALSVQSPFLRSSQQNPDCATARQPLHSNQGDPFTLLNTFNAWVEVKGERGGGSRK
WCRRRGLEEQRLYEMVNLRRQFKDLLKSQGLLESEDSASSSGTRGHRMERLSERRKLHQL
KRDHEQQESTKRKVLRLEEGQEDSSGSDTEDRGRRNKDKDRAGHDLDIQEVKFKLRHNVS
ELHDAVSACQDLSSRKQALLKLLVCRGLYPQLALPDEHNTARKDSDQVFHTKNKQGVVIH
PTSVFASDPEVLHVPEDDGPTKKGSSKHQLLAFVTLLETNKPYLTNCVRVPALQTLLLVA
NSVDSNADCSRLVVDGWLELEFKLPEEALKILSTALLLRAEWERLLLHQLGQGSVLESST
KGVSRKDLEKLSDGLVRFLLYTEVSYSIRRLTALQTQNLYIGPQAEETTYSGVNALFPGV
EAKPDPIKGGLCVNSFFNYNCLSDSRDLYSECLRAFWTCPNCDLYMPLTPLERMQHEATC
RPPGEQQQTEEESVSTKTNLSMSSLTRVYHCDICDKDLTLTSTEILKHKRQHMYSAK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggattcgggacgggggagagagagtcgcagctgggactgggacagcccgcggtgtcga
gccgagctggatgagatcttctttagacaacatgactacattcagagtgggactccggag
cataaggatttttgggctttctttgagcgtttccagagattcaaaacaaagagggagatg
tcaggatattgcggctcagaaaatgaaatagtcaaaaaaagcaagcatcacagggaattg
gacttggggcttcctactgactacgatgctcggtataaaatcaatgtgtctgtgtgcacc
aaagacattgaggaacgcctggggaagcaacacaaaggtggtaggtctttttctggaccg
ggacgtgaagagattgctgagtgtcgcctctcatatctgcattttctggacttctctcag
aaacagagttttaacaaactcgccaaattgcgaagagagcagaagaacttgcccattttc
cagtacaaggaccggataatagagcttgtgagacgccatcctgtggttgtggtggcggga
gacacaggctgtgggaagtcaactcaggttcctcagtatctcctgtcttcaggattcaca
cagatagcctgcactcaaccacgaagaatagcctgtatatctctggccaagagggtcagc
tttgaaagtctaaaccagtatggctcacaggtgggctaccaaatacgttttgagacaact
aggaccacagccactaaactgattttcctgactgaggggctgctgctgcgtcagattcaa
caagatcgagagctgtcccaataccaggtgctgatcgtagatgaggtccatgagaggcat
ctccattgcgactttctcctcggagttctacgctctcttttggaaaatcattcagacctt
cgtctcatcctcatgtcagccaccatcaatatcaaactcttctcaaattatttcaacagt
gctccagtgctgcaggtgcctggcaggttgtttcccatacaggtgacatacagacctatt
cctccggaagaacaggcatcccgctctgagaaacttgacccccgaccatacctgcgtatt
ctccagggcattgaccagcgataccccccagaagaacgcggagacctcctcatctttctg
agtggtttgactgagatttccacaatccaagaggcctgtcagatttatgctacacacaca
cgccgatggatcattttacctctgcacagcactctgtctctggcccagcaggataaggtg
tttgacattgctcctccaggggtcagaaagtgcataatttctacaaatattgctgagaca
tcagttacaatagatggagtgcgttttgttgttgactcgggaaaagtgaaagaaatgagt
tatgatcctaaagccaaaatgcagcgtttgcaggaattttggatcagtagagcaagctca
gaacagcgaaaaggccgagctggtcgcacaggccctggagtgtgttatcgcctttatgct
gaatctgattatgatgcctttgctccatatcctgtgccagaaatccacagagtagccttg
gactccctaattcttcaaatgaaaagcatgggtcttggagatccgctcagctttgtcttc
attgaccctccacctgcagctagcatccaaactgcagtgacctacctcaaagaccagggt
gctctggacagtcaaggtgaattaactactattgggacattactggcacaactaccagta
gacgtggtcataggaaagatgttggttttaggatctgtgttcaaccttgtggagcctgtg
ctgaccatagcagcagctctcagtgttcagtcgccttttctacgcagttcacagcaaaac
ccagactgcgccactgctcgccaacccctgcacagcaaccagggagaccccttcactttg
ctcaacaccttcaatgcctgggtggaggttaagggggagagaggtggagggtctaggaag
tggtgccgcagacgaggtctggaggagcagcggctttatgagatggtcaatttacgcagg
caattcaaggatttgttgaaaagccaaggactgctagaatctgaagacagtgcctcctct
agtggcacccgtggtcatcgcatggagcggctgtcagagagaaggaagctgcatcagctg
aagagagatcacgagcaacaggagagcaccaaacgtaaagtcttgcgactggaggaaggc
caggaggattcatcaggatcagacactgaggacagaggcagacgaaataaggacaaagat
agggcaggccatgatctggacatacaggaggtgaagttcaagttgcgtcacaatgtgtcc
gagctgcacgatgcagtgagtgcctgtcaggacctatcctccagaaaacaggcacttctg
aaactgctggtctgccgaggcctttacccacaactggcattaccagatgaacacaacact
gcccggaaggattctgatcaggtttttcacacaaagaataagcagggagttgtgatccat
ccaacaagtgtttttgccagtgatccagaggtgttgcatgttcctgaagatgatggacct
actaagaagggcagcagcaaacatcagctactcgcctttgtcactctgctggaaactaac
aaaccctatttgacaaactgtgtccgagttccagcactgcagactctactccttgtagcg
aactcagtggacagtaatgctgactgcagtcgtcttgtagtggacggctggctggagctg
gagttcaaattgccagaggaagctctgaagatcctgtccacagctctattgctcagagca
gagtgggagcgccttcttctgcaccagctgggtcagggatcagtgctggaatcatcaaca
aaaggagtgtcccgaaaagacttagagaaattaagtgatggcctggttcgctttctgctt
tacactgaggtcagctatagcatccgtagactgacagctttacaaactcagaacctgtac
ataggcccacaagctgaggagaccacatattctggtgttaacgccctttttccaggagtt
gaggccaaaccagatcccattaaaggaggcctttgtgtcaacagttttttcaattacaac
tgtctgtctgactccagagatctgtacagtgaatgtctgcgtgctttctggacctgtcca
aactgtgatctgtacatgcctctcactcccctggagcgcatgcagcacgaggccacctgc
aggccgccaggagaacagcagcagacagaggaagaatcggtaagcacaaaaacaaacttg
tccatgtccagtttgacaagagtttaccattgtgacatctgtgacaaagatttgactctg
acttcaactgagattcttaaacacaagcggcagcacatgtattctgctaaataa
DBGET
integrated database retrieval system
