Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163827
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Entry
110163827 CDS
T05002
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110163827
00535 Proteoglycans [BR:
bpec00535
]
110163827
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110163827
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110163827
Proteoglycans [BR:
bpec00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110163827
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110163827
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110163827
NCBI-ProteinID:
XP_020784494
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MALFLRLRGLRCCALDSVDPWKSASGGIGFAPVHSSAPSAVSLSLSFPPRSRSLYPESPL
LHDTDTRMGARRCSPRLEPVFGCVLLLLLGPVAPQWPEESGVSLLELIGDPPPEEISREF
GPDNTPGYVFGRDTNTGQLARAHLPNPFHRNFALLFHLKPTTDRAGVVFSVINAQQNLMY
VGVKLSQVQGNNQEVILFYTEPGAQRSFEAARFPVSSLKNIWTRFAVAVDDDRVKFYLNC
DTDPQVTRMERSPEPMQLEPGAGVFVGQAGGADKDKFMGVISELRIVGDPRAAERQCEEE
EDDSDMASGEGSGDIPTRNDGRIPFVTSPPPMREPPVTRPYEPDTHRGTGPAGPRGDKGD
RGERGEKGDRGPQGPRGDTGSSSSRGGGSRGDKGEPGEKGSKGSAGFGYPGSKGEPGPIG
PPGPPGPPGPPAEFSVNSDGTRVSTVPGPRGPPGPPGAPGAEGPAGEDGEPGDPGEDGKT
GPEGPPGFPGTPGDTGPKGEKGDSGEGQPGPRGPPGPPGPPGPGHRSTFVDMEGSGFPDL
ETLRGPPGLPGPPGPPGPPSPSTGTALSSGAFGPPGKDGAPGQPGRPGLPGKEGVIGRPG
PKGEKGDSGVLGRPGAVGAKGDRGEPGLPGSAGEPGLAGLPGPMGPMGPPGPPGPPGPGR
SRAGFDDMEGSGGVGLPGLRGPEGPQGPPGLPGLPGKPGLPGFPGNKGAEGSQGRDGQPG
LDGFPGPQGLKGDRGDKGDRPRLFSHMFLRSLD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttccttcgtctccgcggccttcgctgctgcgctctggactcggtggacccg
tggaaaagcgcgtcaggcggaatcggcttcgctcccgtgcactcctccgctccatcagct
gtctctctctctctttccttccctccacgatcccgctcactttacccggagtctcccctt
ctccacgacacggacacgaggatgggcgccaggaggtgtagcccgcgtttggagcccgtt
ttcggctgcgtcctgctgctcctgctcggtcccgtggctccgcagtggccagaggagagc
ggcgtgtctctgctggagctgatcggagaccctcccccagaggaaatctcgcgagagttc
ggccccgacaacacgcccggatacgtgtttggccgcgacaccaacacaggacagctagct
cgcgcacacttgcccaacccgttccaccgcaactttgccctcctcttccacctgaagccc
accacggaccgagcgggggtggtcttctccgtcatcaacgcccagcaaaacctcatgtac
gtgggggtcaagctctcccaagtccagggcaacaaccaggaggtgatcctgttctacacc
gagcctggagcacagaggagcttcgaagcggctcgcttccctgtgtcgtccctgaagaac
atctggacgcgcttcgctgtcgctgtggacgatgacagagtgaagttttacctgaactgc
gacacggaccctcaggtgacgaggatggagaggagcccggagcccatgcagctggagccc
ggggccggggtgttcgtgggacaggccggaggagccgacaaggacaagtttatgggtgtg
atcagtgagctgaggatcgtgggcgaccccagagccgcagagagacagtgtgaggaggaa
gaggacgactctgacatggcgtctggagaaggaagtggagacatcccaacaagaaacgat
ggcagaattccatttgtgacgtctcctcctcccatgagagaacctccagtgaccagaccc
tacgagcccgacacacacagaggcacaggacccgcgggacccagaggagataagggtgac
cgaggagagaggggggagaagggagacagaggaccccagggacccaggggagatactggg
tcgagcagcagcagaggaggagggtcccgcggagataagggagaaccaggagaaaaaggc
tccaagggcagtgccggcttcgggtatccgggctctaaaggtgagcctggtcccattggg
cccccaggtcctcccggcccccctggtcctccagcggagttttctgtgaacagtgatggg
actagggtttcaactgtgcccggccccagaggtccccccgggcccccaggagccccagga
gctgagggaccagccggagaagacggagagccgggagatcctggtgaagacggaaaaact
ggccccgagggacctccaggattcccagggacccccggagacaccggccctaaaggagag
aagggcgacagtggagaaggccagcctggacccagaggccccccagggcctcctggcccc
cctggacctggacacagatcaacgtttgtggacatggagggctctggcttccctgatctg
gagactctccggggcccccctggtttacctggcccccccggtccccctggtccccccagc
ccctccaccggcactgctctgagctccggggcattcggacccccagggaaggatggagcc
cccggtcagcctggacgacccggtctgcccgggaaagaaggagtgatcggacgcccggga
cccaaaggagaaaagggcgactctggagtcttggggcgacctggagcagtcggtgcaaag
ggggacagaggagagccgggcttgcctgggtctgccggagagcctggtctggccggactt
ccgggacccatgggaccaatgggaccccctggcccccccggacccccaggaccaggaaga
tccagagcaggattcgacgatatggaaggttctggaggagttggacttcctggactcaga
gggccagagggaccacagggcccacctggactcccaggacttcctggtaaaccaggcctc
cccgggttcccaggaaataagggcgctgaggggtctcagggcagagatggacagcctggt
ctggatgggttccctggacctcagggtcttaaaggagacagaggagacaaaggagaccga
ccaaggttattttcacacatgttcctgcgctctctggactga
DBGET
integrated database retrieval system
