Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163908
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Entry
110163908 CDS
T05002
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110163908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110163908
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110163908
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110163908
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110163908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110163908
NCBI-ProteinID:
XP_020784584
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MDKDYFIEDLSSSEDDNLKYSTCKQSGRINRDNSPPAILAFSVTSGQDKLGGQSLHYDTG
DLEEVSTDSDETVEEWMILDKDPREGDATIQLNLSFSISSDENTDHEDKNDTLFPDQWAV
SKRDKEPGKLFSVCRYFTPEQPLFCPVCKKTGHLAKSCLLQKKYAVCVLCGIQGHLQIEC
PNRPCSRCGLLSHGSRACDRQPVWNQHCQRCSLMGHLSDVCPDTWRQYHYTITMTDSPIK
IQTCHTIKQKKRFANCYNCARRGHYGHECSLKRMISGTFFTLPYVCHYDATEEALQSRTR
NNRNLEITKETPLAEQQQLFESLGQICSEDQDLLFQRRTNMKQKAQSSGRKTWPERRRER
QEVKRLRREAQARREGLMGHSQRKSDDDDNLYLESVGPNNPWQCTSPSKKTKKTLHQRNK
NSRKTQREHLKKRRRKMNDFQYPFREMDSENLPSPKQRVRHRRR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggataaagattactttattgaagatttgagttcttcggaggatgataacctgaagtat
tcgacatgcaaacaatctggcagaatcaatagggataactcccctcccgcaatattggct
ttctccgtcacttctgggcaagacaaactgggaggccaaagccttcactatgacactgga
gacctggaggaggtgagcactgattctgatgagactgtggaggagtggatgatcctggac
aaagatccacgggaaggagacgccaccatccaactgaacctgagtttctccatcagctct
gacgagaatacagaccacgaagataaaaatgacacactatttccagatcaatgggcagtc
tcaaaaagagacaaggaacctgggaaactgttttccgtttgccgctactttacgcctgag
cagccactattttgtcctgtttgtaagaaaacaggtcatcttgccaaaagctgcctattg
caaaagaaatacgcagtttgtgtgctttgtgggattcaggggcaccttcaaatagaatgt
ccaaatcgaccctgttccagatgtgggttgctgtcacatgggtccagggcctgtgaccga
cagcctgtgtggaaccaacactgccagcgttgtagcctcatgggacacctctctgatgtg
tgtccagacacatggaggcaataccattacacgattacaatgacggacagtcccatcaag
atacagacatgccacactattaaacagaaaaaacgttttgcaaattgttacaactgtgcc
aggagaggtcattatggtcatgagtgcagtcttaagaggatgattagtggaacttttttc
actctgccgtatgtttgccactatgatgctactgaagaagcccttcaaagcaggactcga
aacaacagaaaccttgaaattacaaaagaaactcctctagctgagcagcaacagttattt
gaaagtttggggcaaatctgttccgaagaccaagatctacttttccaaaggaggaccaac
atgaagcagaaagctcagtcaagtggcaggaagacttggccagagcggcgcagagagaga
caggaggtgaagaggctgaggagggaagcccaggccagaagagaaggactaatggggcat
tctcagcgcaaatctgatgatgatgacaatttatatttggagtctgttgggcccaacaat
ccttggcaatgcacaagcccatcaaagaaaacaaagaaaacacttcaccaaagaaacaaa
aatagcagaaagacacagagagaacatttgaaaaaaagaaggcggaaaatgaatgacttt
caatacccctttagagagatggacagtgaaaatcttccttctcccaaacaaagggtgcgg
catagaaggagataa
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