Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164142
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Entry
110164142 CDS
T05002
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110164142 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110164142 (ndc1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110164142 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
110164142
NCBI-ProteinID:
XP_020784831
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MFSVQQSCWFVRKVICWRAAASIAWAVLLLPPTTAVFVILSRFSVFHPVQWISECLSLLL
SISAIFSLILLCGVVIVIGFLNLEYYTVIPTIACSKIALLGQLLHPRQFFNSLMHCIMGM
IVAWCCAVTIGGRYETLGYSCQQSDVGGPTHMCLNEYHLFLLLSGAFTGLSHSLLDVIHN
MNYVSFNTVQQYKYLRFKGSIPLVVKCSATQALYSLRNFLIVYFFLGHVPKGWLCKTLNL
DADSSVHSLDTVGGLLDLSLLYHTWISASFLLFTWYTTLLLFRIFVTELYSFPVQTSFTD
DAQQCLPKVIAEKQPMILKFLALQDLALLSQHSPMRRAEVFSLSQPGGHPHNWNAISKEC
LWLLSDLTQRLVAYHDTVATNGRAKSLSTGSERKSSSEASVTSGDDPFSPRPAVLLKTPA
SVFARSIAGGPHSPLTAPFTPDLDSPFSSPALRRLTAPAEQFSPWHGTVQSPHIFKRGPK
LWSTSTDSKTNGSPFPSPAPVLSPKQEASKPGFLAKFLQNRREQVKNFMAKRVLIMYLFN
KLPEASSQALFADSQAHIWALEGLSYLVQASYTEDQFGVVQTTLPSILSSMLVLQEAVDR
HFKLPHASSKPSRSGCTMEDCSYKTMRFALRATLKTALYRITTTFGEHLNAVQMSAEHRK
KLQHFLDYKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagttcagcaaagttgttggtttgtccgtaaggtgatttgctggagagctgca
gccagtattgcttgggcagtccttttgttgcctccgaccacagcagtctttgtaatcctc
agccgtttcagtgtttttcacccagtgcagtggatatcagaatgcctgtccctcctgtta
agtattagtgccatattctccctgatccttctttgtggtgttgttattgtgattggcttt
ctcaatctggagtattacacagttattcctacaattgcctgttcaaaaattgccctactt
ggtcagctcctccaccctcgccagtttttcaattctctgatgcattgcattatgggaatg
atagtggcttggtgttgtgctgtcaccattggaggcagatatgagacccttggttactct
tgtcagcagagtgatgtagggggtcccactcacatgtgtctgaacgagtatcatcttttc
cttctgctctctggggccttcacagggctttctcacagccttttggatgtcatccacaac
atgaactatgtctccttcaacacggttcagcaatacaaatatctgcgcttcaagggctcc
attccactggtggtgaagtgcagtgccactcaagcactttattctctcaggaactttctt
atagtttacttctttctgggacatgtacccaaaggctggctgtgtaaaactctaaacctg
gacgcagacagctccgttcactccctggacactgtgggcggcctgctagatctctcctta
ctttaccacacatggatcagtgcctccttcctcctcttcacctggtacaccactctgctg
ctctttaggatttttgtcacagagctgtacagttttccagttcagacttctttcacagac
gatgcccaacagtgtttgcccaaagtcattgcagagaagcagcccatgattcttaagttt
ttagccctacaggacttggcccttctttctcaacactccccaatgcgccgcgctgaggtc
ttcagcctgagtcagccaggtggccaccctcataactggaatgccatcagtaaggagtgt
ctgtggctgctgtctgatctgacccagaggctggtggcctatcacgacactgtggcgaca
aacggccgcgccaagtctctgtccaccggcagtgagaggaagagctcgtctgaagcatca
gtgacttctggagatgaccctttctcccctcggcccgcggttctgctgaagacccccgcc
tctgtgtttgctcgctccatcgctggaggcccccacagccccctgaccgcacccttcacc
ccagacctggacagccccttctcctcccccgccctgcgccgcctcaccgccccagctgaa
cagttctccccctggcatgggactgtacagagcccacacatcttcaagaggggccccaaa
ctctggtccacatccacagactccaaaaccaacggcagcccttttccttctccggcccct
gtgctgtctcccaaacaggaagcctccaaaccaggctttttggctaaattcctccaaaac
aggcgagagcaggtgaaaaatttcatggcaaagcgagtgctgattatgtatttatttaac
aagctccctgaagcatccagtcaggcgctgttcgcagacagccaagctcatatctgggca
ctagaaggattgtcttaccttgtccaggcttcatacactgaagatcagtttggagttgtg
cagactacattacccagcattcttagttcaatgttggtcctacaagaggctgtggaccgt
cactttaagcttccccatgcctcgagtaaaccctctcgctccggctgcacgatggaagac
tgcagctacaaaacaatgcgctttgctcttagggccacgctcaagaccgccctctacagg
atcaccaccacattcggagagcacctcaatgctgtccagatgtctgcagagcatcggaaa
aaactgcaacatttcctggactataaagaataa
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