Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164253
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Entry
110164253 CDS
T05002
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110164253 (taf1b)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110164253 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF1388
Zn_Ribbon_TF
Zn_ribbon_IS1595
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
110164253
NCBI-ProteinID:
XP_020784947
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MDEELTSGYSEPCPRCSETFWGVTDDGQFFCQNCHNVIERTRDVVEAAAPGMSRVSSIKK
GPRVKRAEGGRQWFVCEGFQFILKSQAEALVQLGVDHKFKCSLIGPFEFWTSLFGLFVSS
SSLIAPSDWSVGSLDSEAFVSQSGRRRRGQMSMKKTLALLYVALVWSRQQLTLTDLLSLV
EQGLVPYLNAYECFPEEMKLNNRDGLIFRVLSSRNEMSKWVESVLDQADLMTSSCLTFDP
SRRPKPRLPHYELLAAAAIVVAMKLLFGLDDKTEWELSSEASSDESGDVFSVRRWYRLLQ
AALLRSHRRRLHLKAQKQWVPKNPFYFTHKEKIVALKRRRVSVQLTSCFKRLSSDRDSDT
HSAAQRGGACTSHFLWGRGLDADGRSMRHMTLKGGARISAASQLSDESYWHAPFTDCRRH
LWSLRADVPRMFLWLLDLFCFVLQLKWDVLFQAVSTLERILFKSQNPRSRKNLKRRQKNT
ETRESPEKPKSPETRKTPERRKNPTRLKSPETPTKRLLRRCRAEREEGTP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagctcacgtcgggatactcggagccgtgtccgcgctgctctgagacgttc
tggggagtcacagacgatggacaattcttctgccagaactgccacaatgtcatcgagagg
acgagagacgtcgtggaggccgctgccccggggatgtccagagtgtccagcatcaagaag
ggccccagagtcaagagagcagagggggggcgtcagtggttcgtctgtgaggggttccag
ttcattcttaagtctcaggctgaagctctggtgcagctcggagtcgaccacaagtttaag
tgctctctgattggtccatttgagttctggacctctctgtttggtctgtttgtgtcctcg
agctctctgattgcgccctctgattggtcggtgggctcgttggacagcgaggcgttcgtg
tctcagtcggggaggaggaggagggggcagatgtccatgaaaaagactctggctctgctc
tacgtggctctggtctggagtcgacagcagctcacgctcaccgacctgctgagtctggtg
gagcagggcctggtgccgtacctcaacgcctacgaatgtttccccgaagaaatgaaactc
aacaacagagacggcctcatcttcagagtcctgtcctctcgcaatgaaatgtccaagtgg
gtggagtcggttctggaccaggccgacctcatgacctccagctgtttgacctttgacccc
agtcgtcgtcctaagccccgccttcctcattacgagctgctggccgccgccgccatcgtc
gtcgccatgaagctcctgttcggactcgacgacaaaaccgagtgggagttgtcttctgaa
gcctcctcagatgaatcaggagacgtgttcagtgtgaggaggtggtatcgtctgctgcag
gcggctctgctccggagccacaggaggagactccacctcaaagcccagaagcagtgggtc
ccaaagaatccgttttatttcactcataaagaaaagatcgtggctctgaaacgcagacga
gtgtccgtgcagctcacttcctgtttcaaacgcctctcgtccgatcgtgacagcgacacc
cacagtgcggctcagaggggcggggcctgcacctctcacttcctgtgggggcggggtctt
gatgcggatgggcggagcatgcgtcacatgaccctgaagggcggggccaggatctcagcg
gccagtcagctttcagacgagagctactggcacgcccccttcacggactgtcggaggcac
ctctggtctctccgggccgacgttcctcggatgttcctctggctcctcgaccttttctgc
ttcgtgctccagctgaagtgggacgttttgtttcaggccgtgtcgacgttggagcgaatc
cttttcaaaagccaaaacccacggagccggaaaaatctcaaacgacgacagaaaaacaca
gaaacgcgggaaagccctgaaaaaccaaaaagccccgaaacacgaaaaaccccggaaaga
cggaaaaatcccacacgactgaaaagccccgaaacaccgacaaagagactcttgagacgc
tgcagggccgagcgtgaagagggaacgccctga
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