Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164707
Help
Entry
110164707 CDS
T05002
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110164707 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110164707 (exosc10)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110164707 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
110164707
NCBI-ProteinID:
XP_020785467
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MMDSSKNKDASNSRGQDSSSDTTEEDKPELCPGFKDVDAFVKYGLGAVLSATKASAGLPQ
AGDEFDFYRSFPGFQEFCESQGDKLLICMSQIMQHHGCRSHLRDRSKLTGLEERFDLVVD
SNDVILERVGMLLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGSSSGSRSETFKLLHA
KNVARPQLKFKEKVDNSNTPFIPKIFIKPNAIKPLPSYFSNKQIRKERPEDLDVPAALAD
FIHQQRTREHVDDMFAHPYQFEIDHLTITDSLLLKPEPQMYKELSETKLTYIDTLEELVT
LNEKLCKQNEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNESFTDP
AIVKVFHGADSDIEWLQRDFGLYIVNLFDTHQASRALNLARHSLDHLLKHYCNVDADKRY
QLADWRIRPLPEEMVQYARSDTHYLLYIYDRMRAQLLDFNHGQLGLLQSVWNKSKDISLK
KYIKPIYTEDSYLEVQRKQKRSYNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMNK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAQKKKGLTPVKK
PEVTLFGPHDTSRVSESDIPQFLSHEMPVKQGTLFSEEMDLDIDVNKLRSLMAKPKITIF
EEVVTKKAEDSLSGTQMKARRIIESFENPFRMYLPSDVHVNKNAKFDPNSKIFEISKRWK
LQSIEQQQKELEAKKKAKEEARKVTEERKKAKKSYQESLQDVATVRQQAAESGKAVGKKR
DRVPSEGGESTPKPTKKTKPPQPEAASADTFTPFDYSQSQLKVFSSGAKAKDSTQFDPYR
QGHDSKKKFSKGPKSNPGAGNRSMSYMAAKSNRGFRHNWPKR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatggattcttctaaaaataaagatgcctccaattctagggggcaagacagcagttcg
gacacaacagaggaggacaaacccgagctgtgtcccggatttaaagacgtggatgcgttt
gttaaatatggactgggggccgtgttgtcagccaccaaagcctctgctggcctgcctcaa
gccggagatgagtttgatttctatcggagctttcctggatttcaagagttctgtgaaagt
caaggagataagcttctgatttgcatgagccagattatgcaacatcacggctgcagatcg
cacttgagggaccgcagtaagctgactgggctagaggagaggtttgatctggttgtggat
tcaaatgatgtcatcctcgaacgagtgggcatgctccttgatgaagctgatggggtgaac
agaagccagcagcctgtcatgcccgcaggatttcagcctcctaagattgtggtctctagt
tggaatcgcaagggctcaagttctggcagccgctctgagacatttaaacttctacatgcc
aagaatgtagcaaggccacagctgaaatttaaagagaaggtcgacaacagcaacacacca
tttatccccaagatctttattaaacccaatgcaattaagcctcttccatcctatttcagt
aacaaacaaatccgcaaagaaaggccagaggacctggatgtcccggctgcactggctgat
ttcattcaccagcaacgaactcgggagcatgtggatgacatgtttgctcatccttatcaa
tttgaaattgatcatcttacaataacagacagtctgttattaaagccagagcctcagatg
tacaaagaattgtcagagacaaaattaacttatattgacaccttggaagaattggttaca
ttgaatgagaagctctgcaaacagaatgaatttgccgtggatcttgagcaccattcctac
agaagctttttgggcatcacatgtctgatgcagatttccactagagaagaggacttcatc
atagatacactagagctgcgcagtgagatgtacatcctcaatgaatccttcacagatcct
gccattgtcaaggtttttcatggtgcagactcagacatagagtggctgcagagagacttt
ggcttatacattgtcaacctgtttgacacacatcaggccagccgtgctctaaacctggcc
cgacattcattagaccatctcctcaagcactactgcaatgtggatgcggacaagcgctac
caactcgctgactggagaattcgtccgttgcctgaggagatggtacagtacgctcgctca
gacacccactatctgctctacatctacgaccgcatgagggctcaactgttggacttcaac
cacgggcagctgggacttttacagagcgtttggaacaagagcaaagacatctccctcaag
aaatacatcaagcctatttacacggaggactcatatttggaggtgcagaggaagcagaaa
aggtcttataacacacagcagctcgctgccttcagattactgtttgcctggagggacaag
ctggccaggcaggaagatgaaagcacaggatatgtcctgcccacgcacatgatgaacaag
atatcagaggagctgccaaaagagccacagggaatcattgcttgttgtaaccctgtaccc
ccattggtcagacagcaggtcaatgaactgcatttattagtacaacaggccagagaaatg
cctctccttaaggccgaaattgcagctcaaaaaaaaaaaggacttacgcctgtgaaaaag
ccagaggttactttgtttggtccacatgatacatcacgtgtctctgaaagtgacatcccc
cagtttttatctcatgaaatgccagttaaacaaggaactcttttttctgaagagatggac
ttggatattgacgtaaataaactaaggagtctaatggcaaagcctaaaatcaccatattt
gaggaggtggtaactaagaaagctgaagattcactttctgggactcaaatgaaagccagg
cgtatcatagagtcatttgaaaatccttttcgaatgtatttaccttcagatgtgcatgtc
aacaaaaatgcaaagtttgacccaaactccaaaatatttgagattagtaaacgctggaag
ctgcagagtatagagcaacaacagaaagaactggaggctaagaaaaaagccaaggaagag
gcaagaaaagtgacagaggaaagaaagaaagctaaaaagagctaccaggaatctctgcag
gatgtagccactgtgcgccagcaagcagcagaatctggaaaagcagttggtaagaagaga
gacagggtccctagtgaaggtggagagtctactcccaaacccactaaaaaaacaaagcct
ccgcagccagaggctgcatcagcagacacctttaccccattcgactacagccagtcacag
ctcaaagtgttttctagtggggcaaaagcaaaagacagcacacagtttgatccatacaga
caaggacatgactctaagaaaaagttttctaagggaccaaaatcaaaccctggtgctggg
aatcgaagtatgtcctacatggctgcaaaatcaaatagaggattcagacacaactggccc
aaaagataa
DBGET
integrated database retrieval system
