KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110165414
Entry
110165414         CDS       T05002                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpec03041]
    110165414
Spliceosome [BR:bpec03041]
 Complex B
  Other components
   Complex B specific factors
    110165414
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_WDR75_2nd eIF2A Beta-prop_IP5PC_F DUF7165 Beta-prop_VPS8 WD_LRWD1 PD40 LisH_PAC1 LisH Nbas_N WD40_like Brix LisH_WDR26
Other DBs
NCBI-GeneID: 110165414
NCBI-ProteinID: XP_020786259
LinkDB
Position
Unknown
AA seq 508 aa
MAVEMEPSDVIRLIMQYLKENNLHRTLNTLQEETTVSLNTVDSIDSFVADINNGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREMGAARSLLKQTDPMIMLKQTQPERYKHLESL
LTCTYFDPREAYPKGSSKEKRRRAIAEAMVKEVCVVPPSRLIGLLEQVGVSMKFRQYQGH
LSPDMGFHSPNNEPVEEESYPTQLYRHIKFGRRSHVECARFSPDGKYLVTGSVDGFVEVW
NYITGNISKDLKYQAQDSFMMMDEAVLCMCFSPDGDILATGAQNGKIKIWKIQSGLCVRR
FEHAHSKGVTCLSFSKDSNHILSASFDQTIRIHELRSGKTLKELNGHTSFVNDACFTQDG
FHIISASSDGTVKVWSTKTCDCVHTYKSLTSEVPVNNVIPLPQKPDEFVVCNHSSTVVIM
NLRGQTIKSFSADRKEGAGFVCCTVSPRGEWIYCVGEDLVLYCFSYTTGRLEKTLTVHEK
DVIGIAHHPHESLIATFSEDGLLRLWKP
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggccgtggagatggagccctctgatgtgatccggctgataatgcagtacctcaaagag
aacaacctccaccgaactttaaacacgttacaggaggaaaccacggtctctctgaacaca
gtggacagcatcgacagctttgtggccgacataaacaacggccactgggactcggttctg
ctcgccattgaatctctcaagctgccagacaacactctcattgatctatatgagcaggtt
gtcatggagctgattgagatgagggagatgggggcagctcgctctctcctcaaacagacc
gaccctatgatcatgctcaaacaaactcaacctgaaagatacaagcatctggaaagcctc
ctcacatgcacctacttcgaccccagagaggcctacccaaagggaagcagcaaagagaag
agaagaagggcaatcgctgaggccatggtgaaggaggtgtgtgtggtgcctccatcgcgg
cttataggactcctggagcaagttggtgtgagtatgaaattccgacagtaccaggggcat
ctctccccagatatgggctttcattccccaaacaatgagcctgtggaagaggagagttat
ccaacacaactataccgccacatcaagtttgggaggaggtctcatgtggaatgcgcccgt
ttctctccggacggcaaatacctggtcactgggtcagtggacggatttgttgaagtttgg
aattacatcacagggaatataagcaaagatctaaaataccaggcacaagacagcttcatg
atgatggatgaagccgtactgtgcatgtgtttcagtccagatggagacatactggccact
ggagcgcagaatggaaaaattaagatttggaagatccagagtggtttgtgcgtgcgcagg
tttgaacatgcgcacagcaaaggcgtcacttgtctgagcttttccaaggacagtaaccac
atcctgagcgcctcattcgaccagaccatcagaatccatgagctgaggtcaggaaagaca
cttaaggagctaaatgggcacacatcatttgtaaacgacgcatgtttcacacaagatgga
tttcacataatcagtgcctcatcagatggcactgttaaggtctggagcacaaaaacatgt
gattgtgtccacacatataaatcactgacatctgaagtcccagtcaacaatgtgattcct
ctgccacaaaaaccagatgagtttgtggtctgcaatcactccagcactgttgtcatcatg
aacctgcgcggacaaactataaaaagtttcagtgcagacagaaaggaaggcgctgggttt
gtttgctgcactgtgtctccccgtggagagtggatttactgtgtgggggaggacctggtg
ctctattgcttcagctacaccacaggaagactggagaaaacactgaccgttcacgagaag
gatgtaattggcatcgctcaccacccacacgagagtctgatcgccacctttagtgaggac
ggtctcttgaggctgtggaaaccttga

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