Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110165720
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Entry
110165720 CDS
T05002
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110165720
03015 mRNA surveillance pathway
110165720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110165720
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110165720
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110165720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110165720
NCBI-ProteinID:
XP_020786566
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MADSSWAQAVDAQEREASESINSLQIKDKPEENGAASKTEGEANNKTEDEDKEDKAAQSY
LNKLIRSSLVNNKNEVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMGFNRPSKIQET
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKWPQCLCVSPTYELALQTGKV
IEQMGKHYPEVQLVYAIRGNKLPRGVKLQEQIVIGTPGTMLDWCAKFKFIDPKKIRVFVL
DEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPEPNIIKLKREE
ETLDTIKQYYVLCNSKEEKFEALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVA
LLSGEMQVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERLNTDDLDEIEKIAS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcctcctgggcgcaggccgtggacgcgcaggaacgcgaagcttccgaatcg
attaacagtctccaaatcaaagataaaccagaagagaatggcgcagcttcaaaaacagaa
ggagaagcgaataacaagacagaggatgaggacaaagaggacaaagccgcacagtcttac
ctgaacaaactaatccggagcagtttggtcaacaacaaaaatgaagtggaagttttacag
aaagatccaaattcacctttatattccgtcaaatcttttgaggagctcagacttaaacca
cagctgttacaaggagtgtatgggatgggtttcaacagaccgtctaaaatccaggagact
gcattacccatgatgctcgctgagcctccacagaatctaatcgcacagtcacagtctgga
acaggcaaaactgctgcttttgttctggccatgctcagtcacgtggaccccaacaacaag
tggcctcagtgcttgtgtgtgtcacctacgtatgagctggctctgcagacggggaaggtc
attgagcagatgggcaaacactatcctgaggtgcaactggtctacgccatcagaggaaac
aagttgccgaggggagtgaagctgcaggagcagatcgtgatcgggaccccgggaacgatg
ctcgactggtgcgccaagttcaagttcatcgaccccaaaaagatccgtgtttttgtgctg
gacgaggccgacgtgatgatcgccacacaaggacatcaagaccagagcatacgcatacag
aggatgctgcctaagaactgtcagatgctcctgttctctgccacgttcgaggagacggtg
tggaactttgctcagaggattgtcccagagccaaacatcatcaaactgaagagagaggag
gagacgctggacaccattaaacagtactacgtcctgtgtaactctaaagaggagaagttt
gaggcactctgcaacatctacggagccatcaccatcgctcaggccatgattttctgccac
acgaggaaaaccgccgggtggctggcaggggagctgtctagagagggtcaccaggtggcg
ctgctgagtggagagatgcaagtggagcagagagcggcggtgatcgacagattcagagag
ggaaaagagaaagtgctcgtcacgaccaacgtttgtgccagaggtattgatgtggagcag
gtgtccgtggtgataaactttgacctcccagtggataaggatggtaaccctgacaacgag
acatacctgcaccggattggtcgcacaggtcgcttcggcaagcgcggcctggccatcaac
atggtggacagcaagatgagcatgaacatcctcaaccgcatccaggagcattttaataag
aaaatcgagaggttgaacacggacgacttggacgagattgagaaaatcgccagctaa
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