Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110165892
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Entry
110165892 CDS
T05002
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110165892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110165892
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110165892
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110165892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110165892
NCBI-ProteinID:
XP_020786746
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MLRREIDAEAKGMFGARKKFPDFVEVVDNDFSDDSMYYNQQSMFPHRTDKDMLSSPSPSS
SSQLSQLGASLYGAQTGALGFSVRGMGNSTPQLNRNLTQGNQLPTHITPTTGVPTMSLHT
PPSPSRGTLPMNRNMLNHSQVGQGLGISGRTNSMSSSGLASPNRSSPSIICMPKQQPARQ
PFTINSMSGFGMNRNQAFGMNNSLSGSIFNGTDGSENITGLDLSDFPALADRSRREGTGN
PSAVLSQLSGRAPYVGMVTKPSTDQTQDFSIHNEDFPALPGPNYKDPTLNSDDNKNNLNV
TTKNTCNTDGPKFPGDKPVSVQNNNNQKKGIQVLPDGRVTNIPAGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTN
IHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPG
MEPTLKTNTYERGTYYFFDCINWRKVAKEFHLEYDKLEERPHVPTAYNYNPAQQAF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagagaaattgatgcggaggcaaaaggcatgtttggtgctaggaaaaaattt
cctgactttgtggaggtggtcgataacgacttttcagatgacagcatgtactacaaccag
cagtcgatgttcccccatcggacagacaaagatatgctgtcgtctccctcaccgtcatca
tcgagccagctgtcacagctcggggcaagtttgtatggtgcacaaacaggtgcacttggt
ttctctgtaaggggtatgggcaacagtacacctcagttaaaccgaaatcttactcaaggc
aaccagttaccaactcatatcacccccacaacaggggtcccaaccatgtccctccacaca
cctccatcaccaagcagggggactttgccaatgaacaggaacatgttaaatcactcacaa
gttggtcaaggccttgggatcagtggcagaaccaacagtatgagcagctctggacttgcc
agcccgaaccgtagctccccgagtatcatctgtatgcccaagcaacagccagcacgccag
cccttcaccattaacagcatgtccggattcggaatgaaccgcaatcaggcatttggaatg
aacaattcattatcagggagcatcttcaatggcacagatggaagtgaaaacattacaggt
ctggatctgtcagatttccctgcattggcagatcggagtcgaagagaagggacaggaaac
ccatcggcggtgctcagccagctgtcgggccgagctccttatgttggcatggtgacaaaa
ccctccactgatcaaacacaagatttttctatccacaatgaggacttcccagcacttcct
ggtccaaactataaggacccaacgttaaacagcgatgacaacaaaaataatttaaacgtc
acaaccaagaacacgtgtaacacggatggaccaaaattccctggagacaaacctgtgtca
gttcagaataacaacaaccagaagaaaggaatccaggtgttgcctgatggtcgggtgacg
aacattcccgcggggatggtgacggaccagtttgggatgatcggtctgctcacttttatt
agagcggcagagactgatccaggcatggttcatttggctttaggaagtgacctcaccact
ctggggctcaacctgaactcccctgaaaatctctacccaaagtttgcctcgccgtgggca
tcagcaccttgccgacctcaggacattgactttcatgtcccatctgagtacttaaccaat
atccacataagagacaagctggctgctattaaactggctcgatacggggaggacctgctg
ttctatctgtactacatgaacggaggagacctgttacagcttctggcagcagttgagctc
tttaatcgggactggagatatcacaaagaggagagagtctggataacaagagcacctggc
atggaacccaccctgaagaccaatacttacgaaaggggaacatactacttctttgattgt
attaactggagaaaagtagccaaggagtttcatctcgagtacgacaaactcgaagagaga
cctcatgtgccaacagcgtacaactacaacccagcacagcaggccttctga
DBGET
integrated database retrieval system
