Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110166147
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Entry
110166147 CDS
T05002
Symbol
abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec02010
ABC transporters
bpec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110166147 (abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110166147 (abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpec02000
]
110166147 (abca1)
Transporters [BR:
bpec02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110166147 (abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
110166147
NCBI-ProteinID:
XP_020787007
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTLQLLIEIIWPLFIFFILIAVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRSSTPGESPGMVGNFNDSIISRLITDAKKILLYSQNDK
SYEGYKGLVRALRKMQKNTARFKLKDFLKDNETLSHFLHHNASLPRHDLRQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSKRTQEIICKSSSEWLNKAQRHFLSNLDF
LKPIRKDVKTDPKVVQEVSAATDSLLESLGALAVELGSIDSWKDMRREILYLTGNATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSEIEPVSVYDNSSTPYC
NNLMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGGM
WEEMRPKIWNFMENSEEMDLVRTLLQNNASASFFNTQLSGTEWKVSDVARFLSKVSEGPQ
SVGYTWKEVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGIVF
PDISHGSSSSDLPPNVNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFSYL
QDVIEHGIIRAITGTKERTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGILWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEDDSYNLTTSICLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENKNLSSSQSKSNPEDLCIEEEPGHIE
PGVYIENLVKVYSHGNKLAVDGLTLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYILGKDIRNELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQIV
NDVGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDYDL
TLQSCRNSASTVSYTKKVEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVPDA
RMVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAED
SGVDAVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEESRETDWLSGTDGKGS
YQVKGWSLKRQQFVALLWKRFLYAQRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPS
LPLHPSMYGEQFTFISNDMPDDPHINKLQSALTEKPGFGTHCMEGEPIPDAPCTTVEEEW
SVPEVPLSVSQMFENGNWTMENPSPLCSCSCGGRKRMLPECPAGAGGLPPPQTKISETDT
LQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARNSHLLSQRDEIDEAIA
QLRKRFRLERGTAADRFFHSLSSFIGGLDTNNNVKIWFNNKGWHSIASFLNVMNNGILRA
SLPADKDPSKFGITVHNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFL
IQERVNKAKHLQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVSSTNLP
VLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSNEI
GGINDVLKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFAM
AIEGVVFFFITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILSGGGQTDILELRQ
LTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSEVTGGEAYLAGKS
VTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGLVK
YVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEGRS
VVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVAGPDPDLRPVM
EFIEQELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKETLSIEDYSVSQTTLDQV
FVNFAKDQSDEDHVHLNKRDAVVVDISQLSSFLMDSKTKESCV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccactcagctgggcttactgctgtggaaaaacttcacgtatcgacggaga
caaactcttcagctcttgattgagatcatttggccattgtttatcttcttcatcttgatt
gcagttagaatacattatcccccctatgagcagcatgaatgtcattttcccaacaaggcc
atgccctcagctggtactctgccgtgggtgcaaggcatcatctgcaacgcaaacaacccc
tgcttccgatcctccactcccggagagagccccgggatggtgggaaacttcaacgattca
ataatttctcgtctcatcactgatgccaagaagatcctactgtatagccagaacgataaa
agctatgagggctacaagggcctggtcagagccctcaggaagatgcagaagaacacagcc
cggttcaaactgaaggactttctgaaagataatgagacactttcccatttccttcaccac
aacgcctctcttccccgacacgacctcagacagatcgtggaggctgatgtcaatctggaa
aaggtgctcacaaaaggttttggattccatctgagagatctctgcaacacaacaccctta
gaggagtttgttcatattgccgaccgcaatgtatccaaaaggactcaagaaatcatctgc
aaatcatccagcgaatggttgaacaaagcacagagacacttcctctcaaatctggacttc
cttaaacctattcgaaaagatgtgaagactgatcccaaagtggttcaggaagtctctgct
gcgacggacagtctcctggaaagtctgggtgctctggccgtggagctcggtagtattgac
agttggaaggacatgcgcagagagatcctgtatctcaccggaaacgccacaggctcccca
aaccagatgtaccaggctgtgtcacgaatcgtgtgtgggcaccctgaaggcggcggcctc
aagatcaagtccctcaactggtacgaagacaacaactacaaggccttgtttggaaaccat
ggcaacgacagcgagattgaacctgtctcagtgtatgacaactcctcaactccatattgc
aacaacctgatgcggagccttgagtccagccctatttctcgaatgatctggagggccttg
aagcctctgttgatgggcaagatcctctacactccagacactccagcaacacagagaata
atccacgaggttaataagacattccaggagtttggtgtcttgcgggatcttggcggcatg
tgggaagaaatgagacctaaaatctggaatttcatggagaacagcgaggaaatggactta
gtcaggacattactgcagaacaatgccagtgcttcattcttcaacacacagctgagtggc
acggagtggaaagtgtccgatgtggcgcggtttttgtccaaagtgtctgagggtcctcag
tctgtaggctacacctggaaggaggttttcaatgagaccgaccaggccatacagaccatt
tcccgcttcatggagtgtgtgaatctggacaagctcgagcctgttgctaatgaggagcgg
ctggtaaacaaatctatgggcctccttgacaaccaaaagttttgggcaggaatagtgttt
ccagacatctcccacggtagcagcagttcagatctgccccccaacgtcaactacaaaatt
cgcatggacattgacaacgtggaaaggacaaacaagatcaaagacgcatattgggatccg
ggtcccagagcagatccctttgaggatctgaggtacgtttggggcggattttcctacttg
caggacgtcattgaacatggaataatccgagcaatcactggaaccaaggagaggactgga
atctacattcagcagatgccctatccttgttatgtagatgacatattcctccgagtgatg
agccgctctatgccgcttttcatgaccttggcgtggatgtactccgtggccatcattatc
aaaggagtggtctatgagaaagaggcacgacttaaggagactatgcgaatcatggggctg
aacaatggcattctatggctcagttggttcatcagcagccttataccacttctcatcagc
gctggtttactggtgatgctactcaagatgggaaacctgctgccctatagtgactcaggg
gtggtattcctgttcttgggatcatttggagtggtcacaataatgcagtgtttcctgatt
agcaccctgttttcacgtgctaacttggcagcagcatgcggtggcatcatctacttcacc
ctctaccttccctatgtgctctgtgtggcctggcaagactacgtgggatttggagccaaa
gttgtagtgagtctgttgtcacctgtggcctttggctttggctgcgagtactttgccctg
tttgaagagcaaggagtggggatccagtggtccaatctgctggccagtcccctggaggat
gacagctacaacttgaccacatctatctgcctcatgctgtttgatgctgtactgtatgga
attatgacctggtacattgaggctgtattccctggacaatatggtattcccagaccatgg
tacttccctttcactcggacatactggtgtggagaaaaagaaaacaaaaacctctcaagc
tctcagtcgaaaagcaatcctgaagatctgtgcattgaagaggagcctggccacattgaa
cctggcgtatacattgaaaatcttgtgaaagtgtacagccatggaaacaaactggctgtt
gacggactaactctgagattttatgaaggccagatcacctcattccttggacacaatgga
gccggcaagaccacaactatgtccattctgactgggctgttcccacccacttcaggtact
gcctacatcctcggaaaagacattcgcaatgaactaagcaccatacgccaaaatttggga
gtgtgccctcaacataacgttcttttcagcatgctgaccgtggaggaacacatctggttc
tatgctcgccttaagggtttgcctgaagagaaggtgaaggcagaaatggagcagatagtt
aatgatgtcggattgccccacaaaagaacctccagaactagcactctttctggtggcatg
cagaggaagctgtctgtagcgcttgcttttgttggaggctcaaaggttgtgatcctggat
gagcccactgctggtgtcgacccctacgctcgcagaggcatttgggatcttctgcttaag
tacagacaaggtcgtacaatcattctgtccacccaccacatggatgaagcggacatcttg
ggcgatcgtattgcaattatttcccacggaaagctgtgctgtgttggctcctccctcttc
ctgaagactcacctgggaaccggctactacctgaccctggtcaaacgggactatgactta
acccttcagtcttgcaggaattcagccagcactgtgtcctataccaaaaaagtggaaaag
gaggacagtgtttcagaaagcagttcagatgcaggattggggagtgaaccagagagtgaa
acaactacaattgatgtgtctttgatctccaatgtgattttcaagcatgtcccagatgca
cggatggtggaggaccttggacatgagttgacctatgtcctaccgtaccaatcagccaaa
gatggagcttttgtggagcttttccatgagctggatgatcgtctgactgatctgggaatc
tcaagttatggaatatctgacacaacactggaggagatcttcttaaaagtggctgaagat
agtggcgtggatgcagtcgagctttcagacggggttgtgccgacaaggacacgccgtcgt
catgcttttggagaccaccagagctgcctgaagcccttcactgaggacgactttgatttt
aatgactcagaagaatcccgtgagacagactggctgagtggcacagatggcaaagggtcg
taccaagtcaaaggatggagtctgaagaggcagcagtttgtggctttgctgtggaaacgg
tttctctacgctcaacgctccagaaagggatttttcgctcagattgtgcttcctgcagtt
tttgtttgcatcgctctggtgtttagtctgattgtgccgccttttggaaagtaccccagc
cttcccctgcaccccagcatgtatggagaacagttcaccttcatcagcaatgatatgcca
gacgatcctcatataaacaagctacaaagtgctttgacagagaaaccagggtttgggaca
cattgtatggaaggggaacctataccggatgcaccttgtacgactgttgaagaggagtgg
tcggtgcctgaggtgcccctgagtgtctctcagatgtttgagaatggaaactggaccatg
gagaatccctctcctctttgtagctgcagctgtggggggcgcaagaggatgttacctgag
tgccctgctggtgctgggggtctgcctcctccacagacaaagatcagtgaaacagacaca
cttcagaatttgacaggcagaaacatctcagactatttggtcaaaacctacgctcaaatc
attggaaagagcctgaaaaacaagatttgggtcaatgagttcagatatggtggattttca
ttgggtgccaggaattctcatcttttgtcacagcgagatgaaatcgatgaagctattgct
caactcaggaaacgcttccgactggagagaggaacagcagcagatcgcttcttccacagt
ctctccagttttattggaggattggacaccaacaataatgtcaagatctggtttaataac
aagggatggcacagcattgcatcatttctgaatgtcatgaacaatggcatcctgagggca
agtctcccagcggacaaagacccctccaagtttggcatcacagtccacaatcaccccctc
aaccttaccaaagagcagctgtcgcaagtcgcacttatgacgacctcagtggatgtgctg
gtgtccatctgcgtcatttttgccatgtctttcgtcccggcgagttttgtggtcttcctc
atccaggaaagagtcaacaaagctaaacatctacagtttatcagtggagtgcagcccttc
ctctactggcttgccaactttgtctgggatatgtgtaactacattgtcccagccactctg
gttatcatcatttttgtgtgcttccaacaagacgcttatgtctcctccacaaacctccct
gtgctggctctgctgctcctgctctatgggtggtctatcactcctctgatgtacccagcc
tcattcttcttcaagatccccagcacagcttatgtagttctgaccagtgtcaacatactt
atagggatcaatggtagcgtgtccacttttgtcttggagctgtttggaagcaatgaaatc
ggtggcattaatgacgtcctaaagaacgtcttcctgattttccctcacttctgtctggga
agaggtctgattgatatggtgaagaatcaggcaatggcagatgctcttgaacgctttgga
gaaaaccgtttccgctcccctctggcctgggacatggtgggaaagaacctgtttgcaatg
gccattgagggcgtggtcttcttcttcatcactgtcctgatacagtaccgcttctgcatc
aaggccaggtcatccactagtcacttgaagcctattggagaagaggatgaagatgtggcc
agggagcgtcagaggatcctgagtggaggaggacaaacagatatcctggagctccggcag
ctcacaaagatttacaagagaaagcagaagcctgcagtggaccggctctgtgtgggcatt
ccccctggagagtgctttggtttgctgggagtgaatggagcaggaaaaacaagtacattt
aaaatgcttacgggagactcagaggtcactggcggggaagcctacctggctggaaagagt
gtgacaacagaaattgacgaggtgcaccagaacatgggatactgtcctcagtttgatgcc
attaacgaccttttgacaggcagagagcacctggagttttatgccattctgagaggagtg
cctgagaaggaagtttgtgaggttgcggagtggggcattcgaaagctgggcttggtcaaa
tatgtggataagtcagcgggcagctacagcggaggaaatatgaggaaactttccactgcc
atcgctctgattggagggcctcctgttgtgtttttggatgaaccaacaacaggcatggac
cccaaagcacgtcgagccctgtggaatgctatacttagtatcatcaaagaaggacgatca
gtcgtcctgacttcccatagtatggaagagtgtgaggcactttgcaccagaatggccatc
atggttaatggcaggttccgctgtttgggcagtgtgcaacaccttaaaaacaaattcggt
gatggttacactattattctgcgcgtggcggggccggaccccgaccttaggccggtgatg
gagtttattgagcaggagcttccaggaagtactctaaaagagaaacatcgcaacatgctg
caataccagctcccctcctccctcacctcactcgcccgcatcttctccttactctccaag
aacaaggagacactcagcatagaggactactccgtgtcccagacaactttagaccaagtt
tttgttaattttgccaaggaccaaagtgatgaggaccacgtccatctgaataagcgagat
gctgtagtagtggacatttcacaactcagctctttcctcatggacagtaagaccaaggag
agctgtgtgtga
DBGET
integrated database retrieval system
