Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110166149
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Entry
110166149 CDS
T05002
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110166149 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110166149 (exosc1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110166149 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110166149 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110166149
NCBI-ProteinID:
XP_020787009
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSIEDCIPGTGVYLRHGYIYSALAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMIPISWCEMQCPQTHAKE
FRKVARVQPEYLEA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaagctatgcagcattgaagactgtatt
cctggcacaggagtatatctgcggcatggatacatctactctgcactagcaggctatgtg
ctcagaaaaaacgagggagaggagttgccggtaatctcagtcgtgagggaaacagaaaca
cagctgttgccagatgtaggggcaatagtcacctgtaaggtaactagtataaacccgagg
tttgccaaagtccacattctttatgttggttccacaccgcttaaggaccgctttagggga
acaatcaggaaagaagacgtgcgtgcaactgaaaaagacaaggttgaaacctacaaaagc
ttcagacccggtgacattgttctagccaaagtgatttctctgggtgatgtgcagtctaac
tacttgttgacaactgcggagaatgaactcggtgtagtagtggcccacagtgaagcaggt
gcccagatgatccccatcagctggtgtgagatgcagtgccctcaaacacacgccaaggag
tttcgaaaggtggcccgtgtgcagcctgagtatctggaggcttga
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