Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110166613
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Entry
110166613 CDS
T05002
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110166613 (smarcal1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110166613 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110166613
NCBI-ProteinID:
XP_020787547
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MSNQLTAEQQRRIEENRRKALERRAQRRGQTAPIVRPATTSASSVQSFQSHKPNAAPVGV
IEPTVPLSRPNRFVPPFKTVHNSNTNVHVPDLSSGTTTQSSRSMSTAPPPRKIQIIDVQP
QNKGQHVSSPVLSTGGLAVKPLHAQSNVPSSISEGSASSFYKPPNKSSTNPVARPAPGSS
AVNPAPAKRPAISVRGKCVPHTEGRFRVEVGFHAALIAVFKSIPSRNFDPATKMWNFSLE
DYQHLMRDVASLSSVSLGPLEGMEMLDTEVSSRARDGAALEALLKLCSGWQKPRATLQGQ
CVLVSPSKFEVDIGYHVDVIAAFKQMPTKSYDMTTRKWSFSLEDYKPLMDLLSGIAAVEV
EPLPRAIIQAFSARFEGPQARSVAVPEADLSNIDPTLTTSLMPFQRLGVNFAVSKEGRLL
LADDMGLGKTVQAICIAAYYKSEWPLLVVAPSSVRFTWAEAFKRWLPSLRPESINVVVKA
KDDVRSGLVNIISYDLLSRIDKQNPGNPFKVLIMDESHFLKNIKTARCKAALPLLKAAKR
VVLLSGTPAMSRPAELYTQILAVRPTLFPRFHDFGLRYCDAKQMNWGWDYSGSSNLGELK
LLLEECLMLRRLKSEVLSQLPSKQRKVVTITIDGISTRTKAALSAAAKELAKGHRNKIEE
KEALLVFYNYTAEAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHITSELTKKNVSLIR
IDGTTPSAERQLLCEKFQHSTKPYVAVLSITAANMGLTLHAADLVIFAELFWNPGVLIQA
EDRVHRIGQTCNVNIHYLVAKGTADDHLWPLIQEKMNVLEQVGLSESNLSENAINSSFHS
KDPNQRSIMDMFQRSFTDEDAIDEALLLEAANEWDDTSTSADKNTSSNPNLVTQNTTK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcaactaacagcagagcagcagagaagaatcgaggagaacaggcgcaaagct
ttagagaggagagcgcaaagacgcggacaaactgcgcctatagtcagacctgccaccacc
agcgcgtcatcggtgcagagctttcagtctcacaagccaaatgcagctcccgtcggtgtt
attgagcctacagtgcctctttctcgcccaaatcggtttgtccctccttttaaaacggtc
cacaacagtaacaccaacgtccatgtacctgacttatcatctggcacaaccacacaaagc
agtcgcagtatgtccactgcacctcctcctagaaagatacaaatcattgatgtgcagcct
cagaataaaggtcaacatgttagcagccctgtcttgtctactggaggcctggctgtgaaa
ccgctacatgcacaatctaatgttccctccagcatctctgaaggttcagcgagctctttt
tataaaccacccaataaatcttccacaaatcctgtggcacggcctgctccaggctcctct
gctgtaaaccctgcacctgcgaagagacctgcgatctctgtgagaggcaagtgtgtgcct
cacactgagggccgcttcagagtggaggtgggatttcatgcagcactaatagctgtcttt
aaatccatcccttctagaaattttgacccagctacaaaaatgtggaacttcagtcttgaa
gattatcagcatctaatgcgtgatgtagcgtccctctcctccgtgtctctggggcctctt
gaggggatggagatgctggacactgaagtctcgagtcgcgctcgagacggagcggctctg
gaggctctactgaagctgtgcagcgggtggcagaaacccagagccactttacagggccag
tgtgtccttgtgtctccatccaagtttgaggtggacattggttaccatgtggatgtgatt
gctgcttttaagcaaatgccaaccaagagctatgacatgacaacaagaaaatggagcttc
tcgctcgaggattacaaaccactgatggacctcctgagtgggatagcagccgtggaggtg
gagcctcttcccagggcaataatccaggctttctctgccaggttcgaagggcctcaggcc
aggtctgtagcagtccctgaggcagacctttccaacatcgaccccacactcaccacaagc
cttatgccctttcagaggctgggagtcaattttgcagtgtccaaagagggtcggcttctc
ctggctgatgacatgggtttggggaagaccgtacaggccatttgtatagctgcttactat
aaaagtgaatggcctttactggtggtggctccttcttcagtccgatttacatgggccgag
gccttcaagcgctggctgccctccctgaggcctgagagcattaatgtggtggtaaaagcc
aaagacgacgtccgctctggtttagtcaacatcatcagttatgacctcctgagccgaata
gacaaacagaatcctggaaacccctttaaagttctcatcatggatgaatcccattttcta
aagaacataaagactgcccgttgtaaagcggctcttccacttctaaaggcagcaaagaga
gtggttcttctgtctgggaccccggccatgtccaggcctgcggagctttacactcagatc
ctggctgtcagacccacacttttcccacgctttcacgactttggcctgagatactgtgat
gccaaacagatgaactggggctgggactactcaggctcatctaatctgggtgagctaaag
ctgctgctggaagagtgtctgatgctacggcgcctcaagtcagaagtcctgtcgcagctt
ccttccaaacagagaaaggtggtgacaattaccatcgacggaatcagcaccagaaccaaa
gctgctctgtctgctgctgccaaggagctggcaaagggacaccgcaataaaatagaggag
aaggaagcactgctggttttctataactacacagctgaagccaagttacaagccatcatg
gagtacatcacagacatgctcgaatgtggaagggagaagtttttggtttttgcgcatcac
aagttggtcctggatcatatcacttcagaactgacaaaaaagaacgtgagtttgatccgt
attgatgggaccactccttcagccgaacgccagctgctgtgtgagaagtttcagcactcc
actaagccctatgtggcggtgctgtctatcaccgccgccaacatgggtctgactttacac
gctgctgacctggttatcttcgctgagctcttctggaaccctggggtcctcattcaggca
gaggacagggtgcatcgaattggacaaacctgcaatgtgaacatccactacctggttgcc
aagggaacagctgatgaccacctttggccgcttatccaggagaaaatgaacgtcttggag
caggtcggtctgtctgagtcaaatctctcagaaaatgcaatcaactccagcttccactca
aaggacccaaatcagaggagcatcatggacatgtttcagagatcattcacagatgaagat
gccatagatgaagctctcttgttagaagctgcaaacgaatgggacgacacctccacatct
gctgacaaaaacacaagcagcaatcctaatctggtaacacaaaacacaaccaaatga
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