Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110166786
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Entry
110166786 CDS
T05002
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110166786 (tdrd12)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110166786 (tdrd12)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110166786 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110166786
NCBI-ProteinID:
XP_020787749
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MRSMPWQPFEPEPNMLKISILKVESPGCLWGRVVEGPAGYAQSTGQFDHMMAQMNLFYSD
VTQDQHKLRLTSFEQGQICVVYWPAVKSWCRAKMKAVITDSVSSQAQCFLVDYGEERVVP
IDQIRVAMPDFLLLPFWVRRFHLSGIKPTRLQVSINDEKAKMIPSSHWDSSATLFLHNLL
QGSTQTEAVLYETEDNSTSIQLFLMFGTIKICVNDELVAKKFAYYSKAPAAASGLDEEDQ
KPVMLSSSFLNQAVNQTKPVPQFAPQSPPSTATCTMGPVETCNLPTSACAPETVNDRSNV
EEDCCPDVTETEPLLNNQSDTRSMACAAERFSDCTEETDASLAAALTKNLSLFKFLKFLN
PQSTFNEASSFFNRVNKPENPEDMSTATENCTLLLEWLNPDPLNPDVEIEEAEVPPALNP
EKDLHLVHSVFPLQPCHSLDNAPITDQLRRLIQRKQLYSMCPADRYSWPAVVRGCNTLVV
SPNADQPISYLPPLLTHVLLNSLFSLTSSTGPVVVVVCPGWEKAQAVFDFMEETKVSHIL
HPMIIHVGVKEDEAKTIKIPKNCMIVVSTPFSLVRVFSHHCFLFLRMYHLVLDEVDQLFT
LAPEQMTNILQHFQKVVSSEDKRSCPQQIVAVSKRWTSQMEGLITSHMPHPSIIITVPEE
AALYANIQQIILMSPESSKIDVLLGTLDFSPEVGLKTLIITSSPREADDVFEAVSNKSAF
CMKSHEGLTHEFDFVVQQWRKSIDPGTHVILVTTNECLRCLGIHDASCIIHYGFPSSPRN
FGSRLFSMVKNFRNLTEPVNTGRCLSKSVLIISERNARHVVGVLRYLGRTSAPLPPELLS
FAQSVNVAREDQKTNRPLCSYLKSFGTCRDSSMCADRHCWNPHLDESELPTSGVLEVVPL
LIKTASLFYGRIVTKEENNFESILAEITAFYTDKKQGATEVIEGALYAVQDDDVFHRVKV
LSIPDRRDRLFFSVFVEFIDIGKREEVKAHQLLQLPEQFQSVPGQAVEIIVCRVKPSDSE
KDWHPKVTRAISQKVKGLKHRARVVLSLGNTIFVDPMVRVSHVPGMKTVINEYNLQFEIL
NSGMAESNPEHINLLKALCETNMSSNKLSLYANDVTSLENRIQAEEEVLAKAFGTGQFKN
YMAAGEPVQMLCPLSVITKPVVPCPPTPPPSSLPVSLTPEKLLNHAETTELKMADLSSTI
NSGTQCMSLHPTVRWYQTLDSITVTLKLTNPEVQSCTFSSDRVVFSGRVDDKWYEANLDL
HKNITADRCSWKVKANEPVLTLIKQTPIYWEKLVKEKNIFVNYDLDHFEEDEDRACNGLS
FVADIGEDNLYVNSETDSDID
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcaatgccgtggcaaccatttgaaccagaaccaaacatgctgaaaatatcaatc
ttgaaggtggaaagtcctggctgcctctggggtcgggttgtcgagggccctgctggttac
gcacagtccacagggcaattcgaccacatgatggcacaaatgaaccttttctacagtgac
gttacccaggaccaacacaaactcaggctcacatcttttgagcagggacagatctgcgtg
gtgtactggcctgctgtgaagtcttggtgtcgggcaaagatgaaagcagtcatcacagac
tctgtgtccagtcaagctcaatgcttccttgtcgactatggagaagagcgagtagtcccc
atagaccagattcgagtggctatgccagacttcctgctgctaccattttgggttcggaga
ttccacctttcaggaataaaaccaacacgacttcaagtttctataaatgatgagaaggca
aagatgataccatctagtcactgggacagctctgccacacttttcttgcataatctcctt
caaggctcaactcaaacagaagctgtcttgtatgaaacagaagataattcaacatcgatc
cagctcttcctcatgtttggtaccattaagatctgtgtgaatgacgaactagtggccaaa
aagtttgcctactacagcaaagccccagcagcagcaagtggtttggatgaggaagatcaa
aagcctgtaatgttatcctccagcttcttaaaccaggctgtcaatcagacaaagcctgtg
ccacagtttgccccacaatctccaccatctacagcaacctgtactatgggccctgtagag
acatgcaatttgccaacaagtgcatgtgcacctgagactgtaaatgacagaagtaatgtt
gaggaagattgttgtccagatgtgactgaaacagaaccactccttaacaaccagtcagat
acaagatcaatggcttgtgctgctgaaaggtttagtgactgcacagaagagacagacgcc
tctttggctgcagctttgaccaaaaaccttagtctttttaagtttttaaagtttttgaac
ccacaaagcaccttcaatgaggccagtagtttctttaatcgtgtgaacaaacctgagaac
ccagaagacatgtctacagccactgaaaactgcacactgcttttggagtggctgaacccg
gatcccctaaatcctgatgttgagatagaagaggcagaggttccaccagctttgaatcca
gaaaaggacttgcacctagttcactctgtgttcccgctgcagccatgtcacagcctggac
aatgctcccatcactgaccaacttcgccggctcatacagaggaagcagctctattctatg
tgccccgctgaccgatacagctggccggctgtggttcgtggatgtaacactctggttgtg
tctccaaatgctgatcaaccaatcagctacctcccccctctcctcacccatgtcctgctc
aactccctcttctccctcacttctagcactgggcctgtagtggtggtggtgtgtcctggt
tgggagaaggctcaggccgtatttgactttatggaggagaccaaagtcagccacatcctt
caccccatgattatccacgttggggtcaaagaagatgaagctaaaaccattaagatcccc
aaaaactgcatgatcgtagtgtccactcccttcagtttagttcgggtcttttcccatcac
tgttttctctttctgcgtatgtaccacctggtgctggatgaggtggaccagcttttcacc
ctggccccagagcagatgacaaacatcctgcaacatttccagaaagtggtctccagtgag
gataagagatcgtgtccacagcagattgtggctgtgtccaaacggtggaccagtcagatg
gagggtttaataaccagtcacatgcctcatccatccatcattatcactgtccctgaggag
gctgctctctatgcaaacatacagcagatcatcctaatgagtccggaaagcagcaaaatc
gatgtacttttgggcactttggattttagtccagaagttggattgaaaacattaatcata
acctcctctcctcgggaagcggatgatgtgtttgaagctgtgagcaacaagtctgccttc
tgcatgaagtcccacgagggtctaacacatgagtttgacttcgtcgtccaacagtggagg
aaaagcattgatcctggcactcatgtaattctggtgacgaccaatgagtgtctgagatgc
ctggggatccatgatgcaagttgtatcatccactatggtttcccttcctctcccagaaac
tttggtagtcgtcttttctccatggtcaaaaacttcagaaacctcactgaacccgtaaac
actggccgttgcctttccaaatctgtgttgatcatctccgaaagaaacgctcgtcatgtg
gttggagttttgcgttatttaggccgaaccagtgccccgctccctccagagcttctgtcc
tttgctcagagtgtgaatgtggccagagaggaccagaaaaccaacagacctctctgcagc
tacttgaagagctttgggacatgcagggacagcagcatgtgtgccgatcgtcactgctgg
aatccacatctggatgaatctgagcttcctacatctggagtcttagaggtagtgcctctc
ttaataaagactgcttcactgttttatgggcgcattgtcacaaaagaggaaaacaatttt
gaaagcattttagctgagatcactgctttctacactgataagaaacaaggagccactgag
gtgatagaaggggctttgtacgcagtgcaagatgatgacgtctttcacagggtgaaggtc
ctgtctatccctgacagacgagacagactgtttttcagtgtttttgttgagtttattgac
attggtaaaagggaggaagtcaaagcccatcagctgctgcagttaccggagcagttccag
tctgtcccaggtcaagctgtggagatcattgtgtgtcgagtgaaaccgtctgactctgag
aaagactggcatccaaaggtcacaagagcgataagtcagaaggtcaaaggacttaagcac
agagctcgagtagttctaagtctgggaaacaccatctttgttgaccccatggtacgagtc
tctcacgtaccaggcatgaaaacggtgataaacgagtacaacctccagtttgagatcctg
aacagtgggatggcagagagtaacccggagcacatcaacctcctcaaagctctgtgtgag
actaacatgagcagcaacaagctctcactgtatgcgaacgacgtaacctctttggaaaac
cgtatccaggctgaagaggaggtccttgcaaaagcgtttggaacaggacaattcaagaat
tacatggctgcaggggaaccagtccagatgctgtgtcccctctctgtcataaccaaacct
gtggtcccctgtccccccaccccccctccctcgtctctgcctgtgtctctgacccctgag
aaactcctgaaccatgccgaaacgactgaactgaaaatggctgatctgtccagcactatc
aactcagggacgcaatgcatgagcctgcaccccacagtccgctggtaccagacattggac
tccatcacagtgacgctgaaactgacaaatccggaggttcagagctgtactttctcatca
gatcgagttgtgttcagtgggagagttgatgacaaatggtatgaagccaacctggacctt
cacaaaaacattactgctgatcgttgctcctggaaagtcaaggctaatgaaccagtcctc
acactcatcaagcagactcccatctactgggagaaactggtaaaagaaaagaatatattt
gtgaactacgacttggatcattttgaggaagatgaggaccgagcatgtaacggcttgtct
tttgtggcagacattggggaggacaacttgtacgtgaattcagagaccgactccgacatt
gactga
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