Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110167186
Help
Entry
110167186 CDS
T05002
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110167186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110167186
03036 Chromosome and associated proteins [BR:
bpec03036
]
110167186
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110167186
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110167186
PBAF complex
110167186
GBAF(ncBAF) complex
110167186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110167186
NCBI-ProteinID:
XP_020788157
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MSGGANPTFSGVNPSCTVMSAHKKKESSPPACFWESPETLAQLEVVRQWIGKHYKKYVLV
DAPSCQTLSMVTLQLLQFQEDVFGRQSSNPALTKLPAQCFMDLHPGGGLCHILGIAYKFK
AEQGWRRFDLQNPSRTERNIEMFHSIERALVQNNCLSFPIVYMDPMVDQELAERLSGIIT
KHQGSLTQDRILASHHIYPSLASPEEDEWMRPVMQRDKHVLVHWGMHPDSYDSWLSSLEV
EGAIEETPHLERPCKVHAAWVLDTDCFNEWMNEEDYCVDERNVPVIFRHRIPLRNEDAHS
TPSKKRRRSTSPPSCEGRKKGKKGRKRGQQEEEPEEDLTKDMEDPTPVPNMEEVILPKIV
NLKKDSENTPVKGGIMADLDDQEEDYPGREDEEGRVEMSRFLEGEENITEQTHHVIIPSY
TSWFNNNSIHSIEKRSLPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTSCRRN
LTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPTGLAPLQHKPL
QVSASQHMLYFPDRGREKPSDCQNFGLRTDVYARKHPKTKGASAGREWTEQETLLLLEAL
EVYNDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPV
MSTVAFLASVVDPRVASAAAKAALEEFSRAHEESIDKISEMAVQTEKKEPIDAEKMETNS
TNQSSLRVDGVNLEPSGAQTVEERVKSENAENLLAEDRDGRIDDDDSFEQREGEGELSRA
VMEQDLVEVAVPNAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE
ELETIMDREKEALEQQRQQLLSERQTFHIEQLKQAEIKVRQQREQQGQPGFTMQLTGQSV
PNRIMPSGGTAQVMASRHTGAPNGMYPSSQTEGIAPPVSTHN
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggggcaaaccccacattttctggggttaatccgtcctgcaccgtcatgtcc
gcacataagaaaaaagaaagcagcccgcctgcatgtttctgggagagtccggagacttta
gcgcagctggaggtggtgcgtcaatggattggaaagcattacaaaaagtatgtgctggtg
gatgcgccttcatgtcagactctctccatggtaacccttcagcttctgcagtttcaggag
gatgtttttggaagacaatcctccaatccagccctcaccaaacttccagcccagtgcttt
atggacctacatccaggaggaggactgtgccacattcttgggattgcatataaattcaag
gcggagcaaggatggcggaggtttgacttacaaaatccatcaagaactgaaagaaatatt
gagatgtttcacagtatagagagggcactggtccagaacaactgcctgtcatttccgatt
gtatacatggacccgatggtagatcaggagctagctgaaagactgagtggcattatcaca
aaacaccagggttctctcacccaggatagaatacttgccagccatcatatatatccctca
cttgcgtccccagaagaagatgaatggatgcgtcctgtgatgcagagagataaacatgtt
ttagtacactggggtatgcaccctgacagctatgacagctggttgtcatctcttgaagtt
gaaggagcaattgaagaaacacctcatctcgagcgaccctgcaaggtccatgctgcttgg
gttctggacacagactgttttaacgaatggatgaatgaagaagattattgtgttgatgaa
agaaatgtccctgtaatctttcggcatcgaattcctcttcgcaatgaggatgcacattct
actccttccaaaaagagaaggcggtcaacctctcctccatcttgcgaaggtcgaaagaaa
ggcaagaaaggacgaaagcgtggacaacaggaagaagagccagaggaggatttgaccaaa
gacatggaggatccaacccctgttccaaacatggaagaggtcatattacctaagattgtg
aacttgaaaaaggacagtgagaacactcctgttaaaggaggcatcatggctgatcttgat
gatcaagaggaagattatccaggaagggaggatgaggagggcagagttgaaatgtctcgc
tttctagagggagaggaaaacattacagaacaaactcatcatgttataataccaagctat
acatcttggtttaacaataacagcatacattctattgagaaacgttcactaccagaattc
ttcaatggcaaaaacaaatctaaatcaccggaaatttacctggcttatcgcaactttatg
attgacacatatcgattgaaccctcaagaatatctaagctccacctcctgtaggcggaac
ctcactggagatgtctgtgctgtcatgagggtccatgcatttttggagcaatggggattg
ataaactatcaggtggatgcagaaagcagacccctccccatgggacctcctcctactcct
cattttaacgtcttggctgacactcccactgggctggccccactgcaacacaaacccttg
caggtttcagcctcacaacacatgctgtatttcccagacagagggagagagaagccttca
gattgccaaaactttggtttgcgaacagatgtttatgccaggaaacatcctaagactaaa
ggagcaagtgctggaagggaatggactgaacaagagacacttttactactcgaggcactg
gaggtttacaacgacgactggaataaggtttctgagcatgtcggatctaggacacaggac
gactgtattctgcactttcttcggttgccaatagaagacccctatcttgaagactcctct
gcctctcttggtcctcttgcataccaacctgtccctttcagccaatctgagaaccctgtc
atgagcactgtggccttcctagcatcagtagtggaccctcgagtagcatctgcagccgcc
aaagcagcacttgaggagttctctagagcacatgaggaatctattgacaaaatctctgaa
atggccgtccagacagaaaaaaaagaacctatagatgcagagaaaatggaaactaattcc
acaaaccagagttctttacgtgtggatggggtcaacttggaacctagtggagcccaaaca
gtggaagaaagagttaaaagtgaaaatgcagaaaatttacttgcagaggacagagatgga
agaatagacgatgatgacagttttgagcagcgagaaggcgagggtgagctcagcagagca
gtgatggagcaggatctggtggaggtcgctgtacctaatgcagcggctgcagctctgtcc
tctgctgccaccaaggccaagcatttggcagctgtagaggagcgaaaaatcaagtctctt
gtggctttgctggtggagactcagatgaaaaagttagaaatcaagttgaggcattttgag
gagctggagaccatcatggaccgagagaaagaggcgctggagcagcaacggcagcagctt
ctgtctgagaggcagacttttcacattgaacaactgaagcaggcagaaataaaagttcgg
cagcaaagggagcagcaggggcagcctggtttcacaatgcaactcacaggccagtctgtg
ccaaaccgtataatgccaagcggaggaactgcccaggtgatggcctctcgacacactggg
gctccgaatggcatgtatccatcttcacagacagagggaatagcacctccagtatccact
cacaattaa
DBGET
integrated database retrieval system
