Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110167238
Help
Entry
110167238 CDS
T05002
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110167238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110167238
03036 Chromosome and associated proteins [BR:
bpec03036
]
110167238
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110167238
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110167238
PBAF complex
110167238
GBAF(ncBAF) complex
110167238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110167238
NCBI-ProteinID:
XP_020788222
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MQRDKHVLVHWGMHPDSYDSWLSSLEVEGAIEETPHLERPCKVHAAWVLDTDCFNEWMNE
EDYCVDERNVPVIFRHRIPLRNEDAHSTPSKKRRRSTSPPSCEGRKKGKKGRKRGQQEEE
PEEDLTKDMEDPTPVPNMEEVILPKIVNLKKDSENTPVKGGIMADLDDQEEDYPGREDEE
GRVEMSRFLEGEENITEQTHHVIIPSYTSWFNNNSIHSIEKRSLPEFFNGKNKSKSPEIY
LAYRNFMIDTYRLNPQEYLSSTSCRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLP
MGPPPTPHFNVLADTPTGLAPLQHKPLQVTPREPTFLSVSASQHMLYFPDRGREKPSDCQ
NFGLRTDVYARKHPKTKGASAGREWTEQETLLLLEALEVYNDDWNKVSEHVGSRTQDDCI
LHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPVMSTVAFLASVVDPRVASAAAKAA
LEEFSRAHEESIDKISEMAVQTEKKEPIDAEKMETNSTNQSSLRVDGVNLEPSGAQTVEE
RVKSENAENLLAEDRDGRIDDDDSFEQREGEGELSRAVMEQDLVEVAVPNAAAAALSSAA
TKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSE
RQTFHIEQLKQAEIKVRQQREQQGQPGFTMQLTGQSVPNRIMPSGGTAQVMASRHTGAPN
GMYPSSQTEGIAPPVSTHN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagataaacatgttttagtacactggggtatgcaccctgacagctatgacagc
tggttgtcatctcttgaagttgaaggagcaattgaagaaacacctcatctcgagcgaccc
tgcaaggtccatgctgcttgggttctggacacagactgttttaacgaatggatgaatgaa
gaagattattgtgttgatgaaagaaatgtccctgtaatctttcggcatcgaattcctctt
cgcaatgaggatgcacattctactccttccaaaaagagaaggcggtcaacctctcctcca
tcttgcgaaggtcgaaagaaaggcaagaaaggacgaaagcgtggacaacaggaagaagag
ccagaggaggatttgaccaaagacatggaggatccaacccctgttccaaacatggaagag
gtcatattacctaagattgtgaacttgaaaaaggacagtgagaacactcctgttaaagga
ggcatcatggctgatcttgatgatcaagaggaagattatccaggaagggaggatgaggag
ggcagagttgaaatgtctcgctttctagagggagaggaaaacattacagaacaaactcat
catgttataataccaagctatacatcttggtttaacaataacagcatacattctattgag
aaacgttcactaccagaattcttcaatggcaaaaacaaatctaaatcaccggaaatttac
ctggcttatcgcaactttatgattgacacatatcgattgaaccctcaagaatatctaagc
tccacctcctgtaggcggaacctcactggagatgtctgtgctgtcatgagggtccatgca
tttttggagcaatggggattgataaactatcaggtggatgcagaaagcagacccctcccc
atgggacctcctcctactcctcattttaacgtcttggctgacactcccactgggctggcc
ccactgcaacacaaacccttgcaggtaacacctagagaacctacatttctttctgtttca
gcctcacaacacatgctgtatttcccagacagagggagagagaagccttcagattgccaa
aactttggtttgcgaacagatgtttatgccaggaaacatcctaagactaaaggagcaagt
gctggaagggaatggactgaacaagagacacttttactactcgaggcactggaggtttac
aacgacgactggaataaggtttctgagcatgtcggatctaggacacaggacgactgtatt
ctgcactttcttcggttgccaatagaagacccctatcttgaagactcctctgcctctctt
ggtcctcttgcataccaacctgtccctttcagccaatctgagaaccctgtcatgagcact
gtggccttcctagcatcagtagtggaccctcgagtagcatctgcagccgccaaagcagca
cttgaggagttctctagagcacatgaggaatctattgacaaaatctctgaaatggccgtc
cagacagaaaaaaaagaacctatagatgcagagaaaatggaaactaattccacaaaccag
agttctttacgtgtggatggggtcaacttggaacctagtggagcccaaacagtggaagaa
agagttaaaagtgaaaatgcagaaaatttacttgcagaggacagagatggaagaatagac
gatgatgacagttttgagcagcgagaaggcgagggtgagctcagcagagcagtgatggag
caggatctggtggaggtcgctgtacctaatgcagcggctgcagctctgtcctctgctgcc
accaaggccaagcatttggcagctgtagaggagcgaaaaatcaagtctcttgtggctttg
ctggtggagactcagatgaaaaagttagaaatcaagttgaggcattttgaggagctggag
accatcatggaccgagagaaagaggcgctggagcagcaacggcagcagcttctgtctgag
aggcagacttttcacattgaacaactgaagcaggcagaaataaaagttcggcagcaaagg
gagcagcaggggcagcctggtttcacaatgcaactcacaggccagtctgtgccaaaccgt
ataatgccaagcggaggaactgcccaggtgatggcctctcgacacactggggctccgaat
ggcatgtatccatcttcacagacagagggaatagcacctccagtatccactcacaattaa
DBGET
integrated database retrieval system
