Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110167248
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Entry
110167248 CDS
T05002
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03250
Viral life cycle - HIV-1
bpec03272
Virion - Hepatitis viruses
bpec04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110167248 (pdcd6ip)
03272 Virion - Hepatitis viruses
110167248 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110167248 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110167248 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110167248 (pdcd6ip)
Membrane trafficking [BR:
bpec04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
110167248 (pdcd6ip)
Exosome [BR:
bpec04147
]
Exosomal proteins
Proteins found in most exosomes
110167248 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
AAT
DUF1949
Motif
Other DBs
NCBI-GeneID:
110167248
NCBI-ProteinID:
XP_020788234
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTTTYQGSEEQAEYLRAVEELNKLRKSAVGRPLDKH
DSSLEILLRYYDQLCSVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNSAALASQIAAEQNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMRDGVIAKLANQAADFYGDAFKQCQYKDNLPKEV
LPVLAAKHCIMQANAELHQSMVAKQKKHFGEEIARLQHAAELVKTVASRYDEYVSVKDLS
EKINRALTAAKKDNDFIYNERVPEVKDLEHIGKAALAKPTAITPPISQKFSDLFEKMVPM
AVQQSMSIYNQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQSIVEKS
HGIIQQGGLNSIEQLIKDLPELLTRNREILDESLKMLDDEEATDNDLRSKFNQRWNRTPS
GDLYKPLRAEGANFRNVLDKAVQADQVVRDRYNTHCEMIALLCKPENELNAAIPSANPTK
TLQGSEVVNVLQSLLAQLDEVKRERETLEGEIKAVTFDMSVTFLTALAQDGAINEEQLSL
AQLDQLYGSYNQRVQASLRKQEELLGQVQTSHQEFSNLKQSNSEANQREEILKKLASAYD
SYIEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIAREPSAPS
FNVPAYQSTPAAPAAAPAAGPTPAPRTVFPQQPQQPPAKAAPPARPPPPTXXXXXXSANP
PPVVPPTNNPPPVAPPTQAQGPPYPTYQGYPGYYQMPMGYPYAAYGQYYMPYQANPGQGY
PGAPPTGQPYPGYPQQPPQQQPYYPQQ
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtttatttctgtcccgttgaaaaaatcatccgaggtggatctagtgaaaccg
ctgtcgaaatttgtcacaactacatatcaaggatccgaggagcaggcggagtatctgcgc
gcagtggaagagctcaacaagctacgcaaaagcgctgtgggaaggccgctcgacaaacac
gacagctcacttgagattttacttagatattatgaccaactatgttctgttgagccaaag
ttccctttctctgaaaaccagctttgcctaaccttcacatggaaggatgcctttgataaa
ggatctctatttggtggctcagtcaagcttgctctggccagtttgggctatgaaaaaacc
tgtgtgctgttcaactctgctgctctggccagtcagatcgctgcagagcaaaacctggac
agtgatgaggggttgaaggctgcagcaaaatactaccagctggccagtggcgcatttggc
cacattaaggacacggtgttgtctgctctgaaccgggagcccactatggacatttctcct
gagactgttggtaccctgagtcttattatgttggcccaggcacaagaggtcttctttctc
aaagctacttcagataaaatgagagatggtgtcattgcaaaactggccaaccaggcagca
gacttctatggagatgctttcaagcagtgccagtacaaagacaacctccctaaggaagtg
ctcccggtgctggcagccaagcattgtatcatgcaggccaatgctgagctccaccagagc
atggtggccaagcagaagaaacactttggggaggagatcgctcgtctgcagcatgcagca
gaacttgtaaaaacagtagcatctcgttatgatgaatatgtgagcgtcaaagacttgagt
gaaaaaatcaaccgagccctcacggcagcgaaaaaagacaatgacttcatctacaatgag
cgggttcctgaagtcaaagatctagagcacatcggcaaggctgcattggccaaacccaca
gccatcactcctccaattagtcagaagttttcagatttgtttgagaagatggttcccatg
gcagtgcagcagtccatgagcatttacaaccagaggaaggctgagactgtgaacagactg
gtgggaacaatgagggaggcgaccaacctctgcaatggtgtgttggcatccctaaaccta
cctgctgccctggaggatctgtcgggagactcaatcccacagtcaattgttgagaagtct
catggcatcatacaacaaggaggacttaacagcatcgaacagctcatcaaggacctgcct
gagctgctcactcgtaacagggaaatactggatgagtctctgaagatgttggatgatgaa
gaggcaacagacaacgatctgcgaagcaaatttaaccagcgctggaacaggaccccatct
ggcgacctctacaaacccctccgcgcggagggtgctaacttccgcaacgttttggacaaa
gcagtgcaggcagaccaggtggtgcgagaccgctacaatacccactgtgagatgattgct
ctgctgtgtaaaccagaaaatgagttgaatgctgccatcccctctgcaaaccccaccaag
accctgcaaggaagtgaggtagtgaatgtgctgcagtccctgctggcacaacttgatgag
gtgaaaagggagagggagaccctagagggagagatcaaggccgtcaccttcgacatgtct
gtcaccttcctgacagcgctagctcaagatggcgccatcaacgaggagcagctctcattg
gctcagctcgaccagctgtacggctcttacaaccagagagtacaggccagcctccgcaaa
caggaggagctgctgggacaagtgcagacatcacaccaggagttcagtaacctgaagcag
tcaaactcggaggccaaccagagagaggaaatcctaaagaagctggcctcagcttacgac
agctacatcgaaatcagcagtaacctgcgcgaaggcaccaagttttacaacgacttgaca
gaaattctactgaagttccagaacaagtgcagtgacattgttttcgctcgtaaaacggag
cgtgatgaactacttaaagaattacagcaaagcattgcacgtgagcctagtgctccatcc
tttaatgtacctgcttatcagagcactcccgctgcccccgctgctgcccccgccgctgga
cccacacctgctcctaggactgtgtttcctcaacagccacagcaacctccagcaaaggcc
gctcccccagccagaccccctccacccacnnnnnnnnnnnnnnnnncttcggccaatccg
ccgcccgttgtcccacccaccaacaaccccccacctgtggctcctcccacccaggcccag
ggtcccccataccccacctaccagggttatccaggatactaccaaatgccgatgggttac
ccctatgctgcctatggacagtactacatgccataccaagccaatccaggacaaggatac
ccaggagcgccccccactgggcaaccatatcccggttacccccaacagccccctcagcag
cagccctactatccccagcaataa
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integrated database retrieval system
