Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110167890
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Entry
110167890 CDS
T05002
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110167890 (pms1)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110167890 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
110167890
NCBI-ProteinID:
XP_020788944
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MHQLSAHTVRLLSSSQVITSVLNVVKELTENALDAEATSVDVKLENFGLERIEVRDNGTG
IRAEDAPVMGVRHFTSKISSHDDLENLQTYGFRGEALGSICAVAEVTVTTKTKDDDVSTQ
YSLDSSGNIVSQKPSHLGQGTTVSVQKLFKNLPVRRQFYSSSKKCKEELKRIQDVLTAFA
IVKPELRITLYHNKVVVWQKSKMADLRSALVATLGPSVVSNLLRVYHQHHEPEIVLEGFF
PKPGADYSSTSSSSPDKNFIYINDRPVHNKDISKLIRERYSAQFSEEVRSRFPTFMLRVC
VSAAAVDVNVTPDKTQVLLHHKEAVLAAVEDLLVSLYGPKPITKDHSKEEQPGPKMSNNA
SNSTRDLEQDPIVKSRDISTESSTTTNKNIHISNKEIPNNRSSDISLQSQTSNSSSSSIA
EDWIVNQIPSNFSICDDEELSQNCAKESNSTRNSPEKLEFNNKETSKDKFTAEDWSRGKA
LRDPESNQPLLPVTILQPNSETSKKDANKEAEISNKLVSNSIIEKRAALTAYDVLANRGV
RAPVSPAALFEKETRAEIITQNPKASLHEINESVRERWKTLSQEEKRRFEDKAQKQADLH
EQAKSASAETPKRVNAQGQKRKAAPLSNQQLLDELFSAQPPKKIKVKPSKPSRSVRCSLL
SLRQNLLRLSPSPPPSPPQGLSPLCKLSSQGSWLVLSGRKLQVLNPFRVEEALLFKRLME
NNILPAEDLKDPIQLTEEILGGAEFLEALCGMEQHSPDLDGSIPFSDLRLVANGFKIKLY
PGTCGAGQVQVVAAATCVPFVGVSDLREILVAVVQKRNRAVSQCRPLKVHNYLKGEAVRL
VRQMPSHFSRAEVTETLQRMHTELEQSHRTCLHGRPFLLPLVDLPCTDHEALALAAPAAL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagctctctgcccacacggtgcgcctgctgtccagctctcaggtcatcacgtcg
gtgctgaacgtggtgaaggagctgacggagaacgccctggacgcagaggccaccagtgtt
gatgtcaaactggagaactttggcctggagcgcattgaggtgagggataacgggactggg
atcagagccgaagacgctcctgtgatgggcgtccgacatttcacctccaaaatcagttct
catgatgacctggagaatctgcaaacctatggtttcagaggagaggctttgggctctatc
tgtgctgtggccgaggtgactgtgaccacaaagacaaaagacgatgacgtgagcactcag
tacagtctggactccagcgggaacatcgtctctcaaaagccctctcacctgggacaaggt
acgacagtgagcgtgcagaagctgtttaaaaacctccctgtgcgcagacagttctactcc
tcctcaaagaaatgcaaagaggagctgaagaggatccaggacgtgctcactgccttcgcc
atcgtcaaaccagagctcaggatcacactgtatcacaacaaggtggtggtttggcagaaa
tccaaaatggctgatctcagaagtgccctggtggcaactctgggtccgagtgttgtgtcc
aacctgctccgtgtttatcatcagcaccacgagcctgagattgttttggagggttttttt
cctaaacctggtgcagattacagctccaccagctcctccagcccagacaagaacttcatc
tacatcaacgaccgtcctgtgcacaacaaagacatcagcaagctgatccgtgagcgatac
tctgctcagttctcagaggaggtgaggagcaggtttcccaccttcatgctcagagtttgt
gtttctgcagcagcagttgatgtgaacgtgactccagacaagacccaggtcctgctgcac
cacaaggaggctgtgttggctgcagtagaagatttacttgtttctctttatggccccaaa
cctatcaccaaagaccattcaaaggaggagcaacctggtcccaaaatgtccaataacgca
tcgaattcaaccagagatttagaacaagacccaatagtgaagagtcgagacatttctaca
gaatcttcgacaactaccaacaaaaatattcacatttctaacaaggaaattcccaataac
agaagtagcgacatctcgttacagagccaaacctcaaacagtagctcctcctccatagct
gaagactggatcgttaatcaaattccttcaaacttttccatttgtgatgatgaagaattg
tctcagaattgtgcgaaagaatcaaattcaaccagaaattctccagaaaaacttgaattt
aacaataaagaaacatctaaggacaaatttacggcagaagattggagcagagggaaagct
ttgagagatccagagtcgaatcagccattgctacctgttaccattcttcaaccaaattca
gaaacgtctaaaaaagatgcgaataaggaagctgaaatttcaaacaagctcgtttcaaat
tctatcattgaaaaacgtgccgcgctaacagcttatgatgttttggcgaaccgtggagtg
agggcgccagtctcccccgccgctctgttcgagaaggagacgagagccgaaatcataacc
caaaaccccaaagcgtctcttcacgaaattaacgaatccgtccgcgaaagatggaaaacc
ctgagccaggaggagaagaggaggtttgaagataaggcccaaaaacaggcagacctccac
gaacaggccaaatctgcatctgccgaaacccccaaacgagtcaacgctcaagggcagaaa
cgtaaggcggcccccctgtccaaccagcagctcctagatgaactattctctgctcagccc
ccaaaaaagataaaggtcaagccctccaaaccctctcgctcggtccgctgtagcctgctc
tctctcaggcagaacctcctccgcctctccccttctcccccaccctctcctccgcagggt
ctgtcccccctctgcaagctctcctcacagggatcatggttggtactttctgggcgtaaa
ctccaagtcttgaatccgttccgagtggaggaggcattgctgtttaagaggctgatggag
aataacatactacctgctgaagatctgaaggaccccatacagttaacagaagagatcctg
ggtggagcagagttcctggaggctctgtgtgggatggagcagcacagcccagatctggac
ggaagcattcccttttcagacctccggctcgtggcaaacgggttcaaaatcaaactctac
ccaggtacatgtggtgcgggacaggtgcaggtggttgccgcagcgacgtgcgtgccgttc
gtgggcgtctcggacctcagggagatcctcgtcgccgtggtgcagaagaggaacagagcc
gtgtcccaatgcaggccgctcaaagtccacaactacctcaaaggtgaagctgtgcgactg
gtgcgtcagatgccctcccatttctccagagccgaggtgacagagactctgcagaggatg
cacactgagctggagcagagccacaggacctgtctccacgggcgacctttcctgctcccc
ctggtggacctgccctgcactgaccacgaggccctcgccctggctgcacctgccgctctc
tga
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