Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168027
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Entry
110168027 CDS
T05002
Symbol
prkn
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04120
Ubiquitin mediated proteolysis
bpec04137
Mitophagy - animal
bpec04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110168027 (prkn)
04120 Ubiquitin mediated proteolysis
110168027 (prkn)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110168027 (prkn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110168027 (prkn)
04121 Ubiquitin system [BR:
bpec04121
]
110168027 (prkn)
03029 Mitochondrial biogenesis [BR:
bpec03029
]
110168027 (prkn)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110168027 (prkn)
Membrane trafficking [BR:
bpec04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110168027 (prkn)
Aggrephagy
Other aggrephagy associated proteins
110168027 (prkn)
Xenophagy
Other xenophagy associated proteins
110168027 (prkn)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110168027 (prkn)
Mitochondrial biogenesis [BR:
bpec03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
110168027 (prkn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
IBR_1
ubiquitin
IBR
Rad60-SLD
Rcat_RNF216
Prok-RING_4
zf-C3HC4_3
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110168027
NCBI-ProteinID:
XP_020789092
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MLVWVCYNQGAPVAVEVEDEAKVCDLKREVGGRLGVQSDRLRVLFAGRELLNGATLRSCD
LPEQSTVHVVLPRTNPRPPDQDLNREQNRGPVQGAVRDLNQDYVSLTRVDLSPPEESPES
GDGAQELRAEEEGQGGPLLLGRCADSGSDQRSLSLRRLQRRRRGEGGPSCWDDVQTPGRI
RGVCLSDGCSGGDAEFFFKCASHPTSQDDRSVALDLVTLNSRKVPCIACMDVMDVVVVFP
CAARHVICLDCFRGYAQTRLNERQFVYHQELGYTLPCPAGCENSLIKELHHFRIMGQEQY
DRYLRFGAEQCLLGLGGLLCPGAGSGCGLVFCRDCRQDYHQGACPTAEGAGADAQAPPTE
QSFPVDSEASLRSRWDRDSLLFIKESTKPCPRCAAPVQKNGGCSHMRCPLCHTEWCWVCA
VPWNRDCMGNHWFE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgtgggtgtgttataaccagggagcgcccgtcgccgtcgaggtcgaggacgag
gccaaagtgtgcgacctgaagcgagaggtcggaggtcgtctgggcgtccaatcagatcgt
ctccgggtcctgttcgccgggagagagctgctcaacggcgccacactcaggagctgtgac
ctcccggagcagagcacggttcatgtggttcttccccggactaacccaagaccgccggac
caggatctaaaccgggaacaaaaccgggggccggtccagggtgcggtccgggatctaaac
caggactacgtgagtctgacccgagtggacctgagccctcctgaagagagtccagagtcc
ggagacggagcgcaggagctgagagccgaggaggaggggcagggagggcccctcctgttg
ggacgatgtgcagactccgggtcggatcagaggagtttgtctctcagacggctgcagcgg
aggagacgcggtgagggaggcccctcctgttgggacgatgtgcagactccgggtcggatc
agaggagtttgtctctcagacggctgcagcggaggagacgcggagtttttcttcaaatgt
gcgtctcacccgacctctcaggacgaccgctccgtggctctggacctggtcactctgaac
agccgaaaggtcccctgcatcgcctgcatggacgtcatggacgtggtggtggttttcccg
tgcgccgctcgtcatgtgatctgtctggactgtttccgtggttacgctcagacacgacta
aacgagagacagttcgtttaccaccaagagctcggatacacgctgccctgccctgccggt
tgtgaaaactctctgatcaaagaactgcatcacttcaggatcatggggcaagaacagtac
gaccgttaccttcgcttcggggcggagcagtgccttctggggctgggcgggctgctgtgt
ccgggggcgggctccgggtgtggcctcgtgttctgcagggactgtcgccaggactaccac
cagggggcgtgtccgactgcggagggggcgggggcggacgctcaagccccgcccacagag
cagagtttccctgtggacagtgaggcgtctctgcggtcgcgttgggacagagactctctg
ctgtttatcaaagaatccaccaaaccctgtccccggtgcgccgccccagtgcagaagaac
ggaggctgcagtcacatgcgctgccctctgtgccataccgagtggtgctgggtctgtgct
gtgccctggaacagagactgtatgggcaaccactggtttgaatga
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