Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168137
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Entry
110168137 CDS
T05002
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110168137 (zc3h12b)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110168137 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
PRD_Mga
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
110168137
NCBI-ProteinID:
XP_020789207
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MTAWSMVVKLKMEKHPCREDNIDSTETQPATDESEDGSSSESESEGQQCPRVQVNNSSFR
KRDPLAITKPHRQLCRSPCLDRPSFSQSSTIQDAREDDTSNSVPAFKSVGEKEYQAKKEF
ALKLGYSGEQVEAVLNKLGAAALINDILAELVRLGNKVDPEVQTCTNLSTLVSRSPCVKE
NASPEVSLEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREKGHKDIT
VFVPAWRKEQSRPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPVRSVADELRAFAKLSAVKTMSEGALVK
CGAAAQKGEGSSEAKRVAPKRQSDPSIRSVACEPPEALSVARKSETNSVPSLVTALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFGRSSLEHTSSVQYPPILVTNSHGASMTYSDQFP
KFDSVVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHDHGVYQRNLSHCPESCLSHSNSD
SFSSYGDMYQSSVDSSLDDSLKGMPQSSAQSRMQAFAHGFRHEALTRVQSYGPEDPKQGP
CKPQAAHLAPHIQHAAVGARSSCPGDYPLTQTSLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPLRQRRPPLCREQHASWDPLPCGNESFGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWETASVAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIVT
KLRSCN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatggtccatggtggtgaagctcaaaatggaaaaacacccatgcagggaggac
aacattgactcaactgagacccagcctgccactgacgagtcagaggatgggagcagctca
gagagtgaatctgagggccagcagtgcccccgggttcaggtgaacaacagcagcttcaga
aagagagacccactcgcaatcaccaagccccatcgccaactctgccgctcaccatgcctc
gaccgacccagtttttcccagagtagtacgatacaggatgcccgtgaggatgacactagc
aactctgtaccagcatttaaatctgttggtgaaaaggagtatcaagccaagaaggagttt
gctttaaaactaggttattcaggtgaacaagtggaggctgtgcttaacaaactcggtgct
gctgctctgattaatgatattttagcagaattagtaaggcttgggaacaaggtggatcct
gaagttcagacttgcactaatctatcaactttggtatcacgctctccatgtgtcaaagag
aatgccagtccagaggtgtccttggaagaagaatcagtagacacctacgacaaccttagg
cccattgtgattgatggctcaaatgttgcaatgagccatggaaacaaggaagtattctcc
tgccgtgggattcaacttgctgtggaatggtttagagaaaaaggccacaaagacatcact
gtttttgtcccagcctggagaaaggaacagtcaaggccagatgctctcattacagatcaa
gaaatattacgacggctggagaaagaaaagatattggtttttaccccatcccgtagagtt
caaggcaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattct
gatggaattattgtgtcaaatgacaactaccgggacttgcaaaatgaaaaacctgaatgg
aagaagtttatagaggagcgtctccttatgtactcatttgtcaatgacaaatttatgcca
cctgatgatcctttgggaagacatggtccaagcttagaaaattttcttcggaaacggcca
gttgttccagagcacaaaaaacagccctgtccttatggtaaaaagtgcacatacggacac
aagtgcaagtactatcatcccgagcgtgtgaaccaacctgtccgctcggtggctgatgaa
cttcgagcttttgctaaactgtcagcagtgaagacaatgagtgaaggggctttggtcaag
tgtggtgcagcggctcagaagggcgagggcagctctgaagccaaacgtgtggcacccaaa
cgccagtcagaccccagcattcgctctgtggcctgtgagcctccagaggcgctgtctgtg
gccaggaagtcagagactaattcggtgccttctcttgtgactgctctcagtgtgcccaca
atgcaaccagccaagagccatgcagctggggccttgaacacccgctctgccagcagtcca
gtgcctggctctttgcagtttgggcgcagctctttggagcacacatccagcgtacagtat
ccacctatactggtcaccaacagtcacggagcgtctatgacctactcagaccagttccca
aagttcgactcggtggtcagtgaccacggttattattcactgcacagtgacttctcaaac
atgagcatgagcagcatgcataatgtcgacagtttctgtagcatggagcatgatcatggc
gtctatcagagaaatctcagccactgccctgaatcctgcctcagccactccaacagcgat
tctttctcgtcctatggagacatgtaccagagctcagtagacagcagtctggatgacagt
ctgaagggaatgccacagtcatcagcacagagcagaatgcaggcgtttgcgcacggcttt
cgtcacgaggctctgaccagggttcagagctatggaccagaggatccgaagcaaggtcca
tgtaagccacaagcggctcatctggccccccatatccaacatgctgcagtgggagctagg
tccagctgtcctggagactaccctctaactcagacgtcactcccccctctctcctcacag
cccacacgctcccttggcatgacccgcatggacagcatttcagattccaggttgtacgac
agcaatcctctgagacaaaggcggcccccactgtgtcgtgagcagcacgcgagctgggac
cctctgccttgtgggaatgagtccttcgggtatcactcatacccactgagtaatagcttg
atgccatgttgcgagagagtgatggtccgcagtatgcctgacaaaatggagcaaatttgg
aactctccctgggaaacggcctctgtggcagagcaccaggagcggtacgtcatcccggac
caccaataccaaacatatcgaaacctttgtaacatctttcctgcttatattgttcactct
gtcatggagaagaacccacatcttacagacccacaacaactcgctgcagtcattgttaca
aagttgaggtcgtgcaactaa
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