Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168188
Help
Entry
110168188 CDS
T05002
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110168188 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
110168188 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110168188 (thoc2)
03041 Spliceosome [BR:
bpec03041
]
110168188 (thoc2)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110168188 (thoc2)
Spliceosome [BR:
bpec03041
]
Complex C
Other components
EJC/TREX
110168188 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110168188 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110168188
NCBI-ProteinID:
XP_020789267
LinkDB
All DBs
Position
Unknown
AA seq
1549 aa
AA seq
DB search
MATLTLPAEWIKNWEKSGKHEFVQLCKELTEKINHGSEIKDIQAALYELCSQVIQGNLKV
DLVATVLGEIIELRGDMPSILADVFSILDLETSALEEKNKREHYTQLAVACLIFVPEVIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLNHNLIQLEDLYVHLMPVDAAIIEEYKRDISE
AKQTARKLVMVVLPSEKNDDKDKDKDKDKDDDKNEKPPDNQKLGLLEALLKIGDWHHAQC
IMDQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGARACVMQPLRNKRAPRPAEN
FEDLRRDTFSMLGYLGPHLSHDPILFAKIVRLGKGFMKEYQSDVKSDKEKLEILLSCFLS
IADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYLSHPLLVKVKAQT
IERARYIMKRLTKENVKQSGRQIGKLSHSNPTIVFDYMLSQIQWYDNLIVPVVDSLKYLT
SLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVT
NQLKAGKSFDLLILKEVVQKMAGIEITDEMTAEQMEAMTGGEQLKAEGGYFGQIRNTKKS
SQRLKDALLEHDLALPLCLLMAQQRNGVVFLEGGENHLKLVGHLYDQCHDTLVQFGGFLA
SNLSTEDYIKRVPPIDVLCNQFHTPHDAAFFLSRPMYAHHIVSKYDELKKAEKGNRQQQK
VHKYVAACEQVMNPVHEAVVSLHPTRVWEDMRPNFYVTFWSLTMYDLAVPHSAYEREVNK
LKAQIKAIEDNPEIPLNKKKKEKERCTALQEKLQEEEKKQAEHVQRVLHRLKLEKDNWLL
AKSTKNETITKFLQLCLFPRCIFSSIDAVYCAHFVELIHQQKTPNFCTLLCYDRVFSAII
YTVASCTENESHRFGRFLCCMLETVTRWHSDRAVYEKECSNYPGFVTIFRSTGFDGGHKA
DQLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALE
CRVHKICLEEKDKRPDLYALAMGYSGRLKSQKSHMVPENEFHHKEQPARATAASQQNGPG
GSGKTATSTNKTDDGASEEGERGKEKSQGTTKPVSKANSTAAKVTTSNGNGALNSTKGVK
DDKEKSGKEKKEKKEKTPANTPELKSELRREKHRDERTGKEERATREGKEKTPKAERIKT
EDKNAKDDKAKAGNGEPDAPRESKSKERDRSTAATSLKTPVPRSESAESERDHKRRKLDS
HSSPSHSSSVKDNSTELKESTTKNPVNYNSVDRSKSREREPEKKDSPGRMKEKKEEKDRK
ERKRDHVINDHEASQEVKRRKDENGTNSSKTSKSTSPLCDSPLSTEKEKSKRPKSSSKEK
GESVKTERTSTGGKKESRHDKDKSEKKEKRESTGGKEEKKHHKSSDKHR
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttaccctccctgctgaatggatcaaaaactgggaaaaatcaggaaagcat
gagtttgtacaactctgcaaagaacttacagagaaaataaatcatggaagtgaaatcaaa
gacattcaggcggccttatacgagctctgctctcaggttatacagggcaatcttaaagtg
gatcttgttgctactgttcttggcgaaattatcgaactcagaggtgacatgccatcaatt
ttagcagatgttttcagtattttggacttggagacgagtgcacttgaagaaaagaacaaa
cgtgaacactacacacaactagcagtagcttgtttgatatttgttcctgaagtcattctc
aaagaaagacttgacccagaaacccttgaatctcttggactaataaaacaggcacatcag
tttaatcaaaagattgtaaaaatcaagactaaacttttctacaagcaacagaagttcaac
ttgctgagagaagaaaatgagggctatgccaaactaataacagagttgggccaagacctt
tcaggcaacatcactagccacattgttctggaaagcatcaagtctcttatagggtgcttt
aatttggatccaaatcgagttttagatattattctagaggtttatgagagtcgctcagac
caggatgagtttttcttgtcactcatcaagtcatacatgtgtgagcccctcactctgtgc
cacattctgggatttaaatttaaattttatcaggagcctaatgaggaaacgcccaagtca
ctttatcacattgctgctgctttactgaaccataatctaatacagctcgaagatctctat
gtacatcttatgccagtagatgctgcaattatagaggaatataagcgagacatctcagaa
gccaaacaaactgcccgcaagcttgtgatggttgtcctcccttcagagaagaatgatgat
aaggacaaggacaaggacaaagacaaagatgatgacaagaatgaaaagccacctgacaac
cagaagcttggtctgttagaagcattactaaaaattggagactggcaccatgcccagtgt
attatggaccagatgccttctttctatgctacttctcacaaggccattgctttggcactt
tgccagcttgttcacctaactgtagagccactctacagaagggcgggtgttcccaaagga
gcccgggcgtgtgtgatgcagccactgaggaacaagcgtgccccccgtcctgctgagaac
tttgaagacctacggcgagacacattcagcatgctcggttatctgggtcctcacctgtca
cacgacccgatcctctttgcaaaaatagtacgcttaggcaaaggtttcatgaaagagtat
caaagtgatgtcaaatctgacaaagagaagttggaaatactccttagttgttttctcagc
attgcagaccaggtgctcctgccatctctgtccctgatggagtgcaatgcttgcatgtca
gaagaactatggggtctttttaaattgttcccgtaccagcacaggtatcgattatatgga
caatggaagaatgagacttatttaagccatccactgttggtcaaggtgaaagctcagacc
atcgaaagggcccgatacataatgaagcgactgaccaaagagaatgtgaagcagtctgga
agacagattggcaagttgagccatagcaatcccacgattgtctttgattatatgttgtct
cagattcagtggtacgacaaccttattgtcccagttgtcgactcattaaaatacctcaca
tcacttaattatgacgtcctggcctattgcataatagaggctcttgctaatcctgagaag
gaaaagatgaagcatgatgacactaccatctcgtcctggctacagagtttggcaagtctt
tgtggggctgtgttcaggaagtacccaattgagttggcggggcttcttcagtatgtgacc
aatcagctcaaggcaggaaaaagttttgacctgttgatcctaaaagaagtggtccagaaa
atggctgggattgagattacagatgagatgacagcagagcagatggaggccatgacggga
ggagagcaactaaaggctgagggaggctattttgggcagataagaaatacaaagaaatca
tcacaacgtctaaaggatgctctgcttgaacatgatttggcgttacctctgtgtttactc
atggcgcaacaacgcaatggtgttgtttttcttgaaggtggagagaaccacttgaaactt
gttggtcatctctatgatcagtgtcacgacacattggtgcaatttggtggctttttggcc
tccaacctcagcactgaagactatattaaacgtgttcctcctattgatgttctatgcaac
cagttccacaccccacacgatgctgcgttttttctgtctaggcccatgtatgctcatcac
atagtgtccaagtatgacgaactaaagaaagcagagaagggcaaccgtcagcagcaaaag
gtacacaaatatgtggcagcctgtgaacaggtaatgaacccagttcacgaggcagtggtg
tcactccaccccactcgagtgtgggaagatatgcgccctaatttctacgtgacgttctgg
tccctcactatgtacgacctggctgtgccacattctgcttatgagcgtgaggtcaataag
ctcaaagctcagattaaagccattgaggataaccctgaaattccgctaaataagaaaaag
aaggagaaggaacgctgtacagcattgcaagagaaattgcaagaggaagagaagaagcag
gctgaacatgttcaaagagtgctccatcgtctcaaactagagaaagataactggttatta
gcaaaatcaacaaagaatgagacgataacaaaattcctgcaactctgcctatttccacgt
tgcatcttctcatccattgatgccgtttactgtgcacactttgttgaactgattcaccag
caaaagacgcccaacttctgcaccctcctatgctatgacagggttttttcagccatcatc
tatacagtggctagctgtacagagaatgagtctcaccgctttgggcgcttcctgtgctgc
atgttggagactgtgacccgctggcatagtgaccgggctgtctatgaaaaggagtgtagc
aactaccctggcttcgtaactatcttcagatcaacgggttttgatggaggacacaaagca
gaccagctggactatgagaactttagacacgtggtgcacaaatggcactatatgctgacg
aaagcttcagttcactgcttggagacgggagactatacgcacattaggaatattcttatt
gtgctcaccaaaatcttgccttgctacccaaaagtcctgaacctaggccaagctttggag
tgtcgtgttcacaagatctgtcttgaagagaaggataagaggccagacctttatgcctta
gcaatgggttattcaggtcgattgaaaagccagaagtcgcacatggtccctgaaaatgag
tttcatcacaaagagcagccagcacgtgctaccgcagccagtcaacagaacggtccagga
ggctctggaaaaactgctaccagcacaaacaagaccgatgatggggcatccgaggaagga
gaacgaggcaaagagaaatctcaggggaccacaaaaccagtcagcaaagccaacagtaca
gcggccaaagtgaccaccagcaatggaaatggtgctctgaatagcactaaaggagtgaaa
gatgacaaagaaaagagcgggaaagagaagaaggagaagaaggagaagactccagccaac
actccggagctgaagagcgagctgaggcgagagaagcacagggacgagcgcacaggaaaa
gaggagcgggccacacgcgagggtaaggagaagacccccaaggctgagcgcatcaagacc
gaggacaagaatgccaaagacgacaaggccaaggccggtaatggagaacctgacgcgccc
agggagtccaagagtaaggagagagaccgcagcactgcagcaacctcactcaaaacgcca
gttcctaggtctgagtcggctgaatctgaaagggatcacaaaagaagaaagcttgatagc
cactcctctccatcccactcctcgtctgttaaggacaatagcaccgaactcaaggagtcc
acaaccaagaaccctgtcaactacaattctgtcgaccgatccaagagcagagagagggag
ccagagaagaaagactcaccaggacgaatgaaagagaagaaagaagaaaaagatcgtaaa
gagaggaaaagagaccatgttatcaatgaccacgaggccagtcaggaagtcaaacgtagg
aaagatgaaaatggaacaaattcctccaagaccagcaagagcacaagccctttgtgcgac
tctccactttcaactgagaaagagaagagcaagagaccaaagtcgtcaagtaaagagaaa
ggcgagtctgtgaaaacggaaagaacttcaactgggggcaaaaaggagtccagacatgac
aaagacaaatctgaaaagaaagaaaaaagggagagcacaggtggaaaagaagaaaaaaag
catcataaatcctccgacaagcatagataa
DBGET
integrated database retrieval system
