KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168571
Entry
110168571         CDS       T05002                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110168571 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpec03019]
    110168571 (wdr82)
   03036 Chromosome and associated proteins [BR:bpec03036]
    110168571 (wdr82)
Messenger RNA biogenesis [BR:bpec03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110168571 (wdr82)
Chromosome and associated proteins [BR:bpec03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110168571 (wdr82)
    COMPASS/SET1 complex (yeast)
     110168571 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 WD_LRWD1 Beta-prop_HPS5 MinC_C VPS8_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 110168571
NCBI-ProteinID: XP_020789676
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGXXXXXXINSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctgcggagtttcagggtagctaaagtgttccgagaaaac
tccgacaaaattaattgttttgattttagttcaaacggtgaaactattatatccagtagc
gacgatgattctctagtcctgtacgactgccaagagggaaaacccaagaggacactttat
agtaaaaaatacggggtagatctcatcaggtacacacatgcagccaacacagtggtctac
agctcgaacaaaattgatgatacaatcaggtatctgtcacttcatgataacaaatacata
agatattttcctgggcataataaaagagtaacgtccttatccatgtctcctgtggatgac
acctttatatccggttcattagataaaactattagactatgggatctgcgctctccaaat
tgtcagggtcttatgcacctacaggggaagccggtctgttcctttgacccagagggnnnn
nnnnnnnnnnnnnnnataaattctgaaatggtgaagctgtatgatcttcgttcatttgac
aagggtccatttgccacctttaaacttcagtatgagcgaacatgtgagtggactgggctt
aagttcagtaatgacgggaaactgattcttctctccacaaatggaggagccctgcgcatc
ctggatgctttcaagggtgctgtactacattcatttgggggctacaacaacagtaaaggt
gtaacattggaagcatccttcactccagattcacagttcgttatgattggttcagaggat
ggaaagatccatgtgtggaacgcagagagtgggatgaaggtggctcttttagatgggaag
cacacagggcccatcacttgtctgcagttcaacccaaagttcatgacatttgcaagcgcc
tgctccaacatggcgttttggcttccaaccattgatgactga

DBGET integrated database retrieval system